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L3_068_000M1_scaffold_907

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_907_1
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

484..1719
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01714.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_068_000M1_scaffold_907_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1788..2354)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01715.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_3
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2486..3622)
DNA (1137bp) protein (379aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N605_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC01716.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4116..4652)
DNA (537bp) protein (179aa)
Rubrerythrin n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVH6_9FIRM
Rubrerythrin {ECO:0000313|EMBL:CDC01717.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
rbr2; rubrerythrin Rbr2
L3_068_000M1_scaffold_907_5
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4901..5626
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPW6_9FIRM
L3_068_000M1_scaffold_907_6
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6177..6749)
DNA (573bp) protein (191aa)
HD domain protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSK2_9FIRM
HD domain protein {ECO:0000313|EMBL:CDC01720.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
HAD superfamily hydrolase
L3_068_000M1_scaffold_907_7
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6762..7463)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N608_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01721.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_8
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7728..10268)
DNA (2541bp) protein (847aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVI1_9FIRM
L3_068_000M1_scaffold_907_9
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10288..10710)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01723.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
conserved hypothetical protein TIGR00051
L3_068_000M1_scaffold_907_10
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10920..12869)
DNA (1950bp) protein (650aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0B6_9FIRM
L3_068_000M1_scaffold_907_11
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13853..14605)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01725.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14728..15009)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N613_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01726.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15011..16108)
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVI6_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
DNA replication and repair protein RecF
L3_068_000M1_scaffold_907_14
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16126..16338)
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPX5_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC01728.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_068_000M1_scaffold_907_15
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16328..17434)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0B9_9FIRM
L3_068_000M1_scaffold_907_16
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18202..19527)
DNA (1326bp) protein (442aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSK9_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
chromosomal replication initiator protein DnaA
L3_068_000M1_scaffold_907_17
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20022..20156
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N617_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
LSU ribosomal protein L34P
L3_068_000M1_scaffold_907_18
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20230..20568
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVJ1_9FIRM
L3_068_000M1_scaffold_907_19
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20821..21813
DNA (993bp) protein (331aa)
Membrane protein insertase YidC/Oxa1 family C-terminal domain n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPX9_9FIRM
Membrane protein insertase YidC/Oxa1 family C-terminal domain {ECO:0000313|EMBL:CDC01733.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_068_000M1_scaffold_907_20
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21832..22620
DNA (789bp) protein (263aa)
R3H domain protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0C3_9FIRM
R3H domain protein {ECO:0000313|EMBL:CDC01734.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
single-stranded nucleic acid binding R3H domain-containing protein
L3_068_000M1_scaffold_907_21
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22696..24060
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
tRNA modification GTPase MnmE n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSL2_9FIRM
tRNA modification GTPase TrmE
L3_068_000M1_scaffold_907_22
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24203..26068
DNA (1866bp) protein (622aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N621_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
glucose-inhibited division protein A
L3_068_000M1_scaffold_907_23
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26081..26791
DNA (711bp) protein (237aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVJ6_9FIRM
L3_068_000M1_scaffold_907_24
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26794..27567
DNA (774bp) protein (258aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPY2_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CDC01738.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_068_000M1_scaffold_907_25
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27718..28395
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0C7_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC01739.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000M1_scaffold_907_26
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28382..29956
DNA (1575bp) protein (525aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Histidine kinase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSL8_9FIRM
histidine kinase
L3_068_000M1_scaffold_907_27
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30276..31091)
DNA (816bp) protein (272aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NVK3_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDC01742.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
AraC-type DNA-binding domain-containing proteins
L3_068_000M1_scaffold_907_28
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31250..32089
DNA (840bp) protein (280aa)
Transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MPY7_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC01743.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
AraC family transcriptional regulator
L3_068_000M1_scaffold_907_29
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32404..33255
DNA (852bp) protein (284aa)
fumarase alpha subunit (EC:4.2.1.2)
Fumarase alpha subunit n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N0D0_9FIRM
Fumarase alpha subunit {ECO:0000313|EMBL:CDC01744.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
L3_068_000M1_scaffold_907_30
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33269..33823
DNA (555bp) protein (185aa)
fumB; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydrolyase tartrate beta subunit/fumarate domain protein Fe-S type n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSM3_9FIRM
Hydrolyase tartrate beta subunit/fumarate domain protein Fe-S type {ECO:0000313|EMBL:CDC01745.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Displaying items 1-30 of 55 in total

View Taxonomy