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L3_068_000M1_scaffold_2179

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2179_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..310
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26382.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
CRISPR-associated Cas4 family protein
L3_068_000M1_scaffold_2179_2
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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323..1315
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
CRISPR-associated protein Cas1 n=1 Tax=[Clostridium] glycolicum RepID=UPI00036FA117
maturase-related protein
L3_068_000M1_scaffold_2179_3
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1324..1602
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Clostridium tetani 12124569 RepID=U6EV70_CLOTA
CRISPR-associated Cas2 family protein
L3_068_000M1_scaffold_2179_4
unknown

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comp(2300..2566)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_068_000M1_scaffold_2179_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3999..4307)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19843.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_068_000M1_scaffold_2179_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4536..4739
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19815.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_068_000M1_scaffold_2179_7
unknown

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comp(7668..8642)
DNA (975bp) protein (325aa)

This feature has no annotations

L3_068_000M1_scaffold_2179_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8754..9548)
DNA (795bp) protein (265aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LV45_9CLOT
HAD-superfamily hydrolase
HAD-superfamily hydrolase {ECO:0000313|EMBL:CDM68225.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_068_000M1_scaffold_2179_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9596..9958
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02211.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
macrophage migration inhibitory factor
L3_068_000M1_scaffold_2179_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9992..10471
DNA (480bp) protein (160aa)
YxjI n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY47_9FIRM
YxjI {ECO:0000313|EMBL:CDB41945.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_068_000M1_scaffold_2179_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10576..13158
DNA (2583bp) protein (861aa)
adhE; aldehyde-alcohol dehydrogenase (EC:1.1.1.1 1.2.1.10)
Aldehyde-alcohol dehydrogenase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLD7_CLOSA
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_2179_12
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13417..14583
DNA (1167bp) protein (389aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Tryptophan synthase beta chain n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJJ0_CELLD
L3_068_000M1_scaffold_2179_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14976..17618
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
valS; valine--tRNA ligase ValS (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCB8_9CLOT
Displaying 13 items

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