ggKbase home page

L3_068_000M1_scaffold_2429

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2429_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64..702)
DNA (639bp) protein (213aa)
Sporulation protein YunB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMW0_CLOSA
yunB; sporulation protein YunB
Sporulation protein YunB {ECO:0000313|EMBL:AGX42144.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_2429_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

794..3118
DNA (2325bp) protein (775aa)
pbpA1; penicillin-binding protein 1A (EC:2.4.2.- 3.4.-.-)
Penicillin-binding protein 1A {ECO:0000313|EMBL:AGX42143.1}; EC=2.4.2.- {ECO:0000313|EMBL:AGX42143.1};; EC=3.4.-.- {ECO:0000313|EMBL:AGX42143.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Penicillin-binding protein 1A n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNP4_CLOSA
L3_068_000M1_scaffold_2429_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3138..3968)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TML0_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY81885.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_068_000M1_scaffold_2429_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4157..4570
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97461.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ytxH-like family protein
L3_068_000M1_scaffold_2429_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4570..4887
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028824FA
Uncharacterized protein {ECO:0000313|EMBL:EEH97460.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_068_000M1_scaffold_2429_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4913..5995)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70841.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
acetyltransferase domain protein
L3_068_000M1_scaffold_2429_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6184..6723
DNA (540bp) protein (180aa)
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q3E6_9CLOT
DNA-binding protein {ECO:0000313|EMBL:ERK30584.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
DNA-binding protein
L3_068_000M1_scaffold_2429_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6740..7789
DNA (1050bp) protein (350aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFW5_9CLOT
L3_068_000M1_scaffold_2429_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7782..8621
DNA (840bp) protein (280aa)
Spermidine/putrescine ABC transporter permease PotB n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG53_9CLOT
Spermidine/putrescine ABC transporter permease PotB {ECO:0000313|EMBL:EOR26196.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
binding--dependent transport system inner membrane component family protein
L3_068_000M1_scaffold_2429_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8615..9403
DNA (789bp) protein (263aa)
Spermidine/putrescine transport system permease protein PotC n=2 Tax=Clostridium botulinum B RepID=B2TMK5_CLOBB
spermidine/putrescine transport system permease protein PotC
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:ACD22301.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_068_000M1_scaffold_2429_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9403..10449
DNA (1047bp) protein (349aa)
CINTURNW_nithine carbamoyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2PWQ0_9CLOT
CINTURNW_nithine carbamoyltransferase {ECO:0000313|EMBL:ERK30890.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
L3_068_000M1_scaffold_2429_12
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10473..10898)
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
Nucleoside diphosphate kinase n=1 Tax=Clostridium sp. CAG:411 RepID=R7I6D3_9CLOT
ndk; nucleoside diphosphate kinase
L3_068_000M1_scaffold_2429_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11043..11315
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H894_9CLOT
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acylphosphatase
L3_068_000M1_scaffold_2429_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11392..12774)
DNA (1383bp) protein (461aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFW8_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EEH98776.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative transporter HI_0883
L3_068_000M1_scaffold_2429_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13126..13446)
DNA (321bp) protein (107aa)
SCP-2 sterol transfer family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELB0_9FIRM
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EEQ58449.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SCP-2 sterol transfer family.
L3_068_000M1_scaffold_2429_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13416..13847)
DNA (432bp) protein (144aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2K9_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EKY22239.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator
L3_068_000M1_scaffold_2429_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14035..15705)
DNA (1671bp) protein (557aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
leuA1; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
2-isopropylmalate synthase n=2 Tax=Clostridium butyricum RepID=B1R1D5_CLOBU
Displaying 17 items

View Taxonomy