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L3_068_000M1_scaffold_1248

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1248_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

235..1494
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70984.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_068_000M1_scaffold_1248_2
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1693..2157
DNA (465bp) protein (155aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DFK3_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDD88172.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_068_000M1_scaffold_1248_3
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2297..3490)
DNA (1194bp) protein (398aa)
ATPase component BioM of energizing module of biotin ECF transporter {ECO:0000313|EMBL:KJR45502.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
Putative uncharacterized protein id=1268195 bin=GWE1_Spirochaetes_32_154 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
hypothetical protein
L3_068_000M1_scaffold_1248_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3778..4284)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QE13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26191.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
citrulline cluster-linked gene
L3_068_000M1_scaffold_1248_5
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4537..6189
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B4B4FE
Uncharacterized protein {ECO:0000313|EMBL:EUZ69182.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_068_000M1_scaffold_1248_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6271..7329
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003796EB3
HRDC domain-containing protein {ECO:0000313|EMBL:EOR21054.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
HRDC domain-containing protein
L3_068_000M1_scaffold_1248_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7424..8395
DNA (972bp) protein (324aa)
bioB; biotin synthase BioB (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Biotin synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MLL6_9CLOT
L3_068_000M1_scaffold_1248_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8388..9074
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25765.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative secreted protein
L3_068_000M1_scaffold_1248_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9257..10030
DNA (774bp) protein (258aa)
thiG; thiazole synthase ThiG (EC:2.8.1.10)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Thiazole synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK34_CLOBU
L3_068_000M1_scaffold_1248_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10044..11201
DNA (1158bp) protein (386aa)
Thiazole biosynthesis protein ThiH n=2 Tax=Clostridium RepID=A6LTL6_CLOB8
thiH1; thiamine biosynthesis protein ThiH
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:AJG98337.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_068_000M1_scaffold_1248_11
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11332..11862
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0P8U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86268.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_068_000M1_scaffold_1248_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12014..12319
DNA (306bp) protein (102aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium butyricum RepID=B1R1G1_CLOBU
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
anti-sigma-factor antagonist
L3_068_000M1_scaffold_1248_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12367..14466
DNA (2100bp) protein (700aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
isoamylase (EC:3.2.1.68)
UPI0003D6241E related cluster n=1 Tax=unknown RepID=UPI0003D6241E
L3_068_000M1_scaffold_1248_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14489..14902
DNA (414bp) protein (138aa)
UPI0003D5B3C5 related cluster n=1 Tax=unknown RepID=UPI0003D5B3C5
Anti-sigma regulatory factor {ECO:0000313|EMBL:ETI89380.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
anti-sigma regulatory factor, serine/threonine protein kinase
L3_068_000M1_scaffold_1248_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14928..16892
DNA (1965bp) protein (655aa)
Serine phosphatase n=3 Tax=Clostridium butyricum RepID=B1R1F8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85367.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_068_000M1_scaffold_1248_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17172..18518)
DNA (1347bp) protein (449aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium colicanis 209318 RepID=N9WGR1_9CLOT
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L3_068_000M1_scaffold_1248_17
unknown

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comp(18627..18950)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_068_000M1_scaffold_1248_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18931..20226)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQH5_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68023.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_068_000M1_scaffold_1248_19
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(20239..21150)
DNA (912bp) protein (304aa)
ATP-binding region ATPase-like protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KP33_9CLOT
ATP-binding region ATPase-like protein {ECO:0000313|EMBL:CCY62891.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L3_068_000M1_scaffold_1248_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21184..21831)
DNA (648bp) protein (216aa)
Uncharacterised protein {ECO:0000313|EMBL:CEP94650.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_068_000M1_scaffold_1248_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21846..22919)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZAM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ94723.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
L3_068_000M1_scaffold_1248_22
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22937..23866)
DNA (930bp) protein (310aa)
DNA polymerase III subunit epsilon n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F4Y5_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:KEI11776.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
exonuclease RNase T and DNA polymerase III
L3_068_000M1_scaffold_1248_23
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24187..24720)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 RepID=C3G714_BACTU
ans operon repressor protein
Helix-turn-helix family protein {ECO:0000313|EMBL:AJH03852.1}; TaxID=1452729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis HD1002.;"
L3_068_000M1_scaffold_1248_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24876..25094
DNA (219bp) protein (73aa)
Conserved domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5USA0_CLOBO
Conserved domain protein {ECO:0000313|EMBL:EES50390.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_068_000M1_scaffold_1248_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25281..25844
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97406.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_068_000M1_scaffold_1248_26
unknown

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25857..25997
DNA (141bp) protein (47aa)

This feature has no annotations

L3_068_000M1_scaffold_1248_27
unknown

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26002..26481
DNA (480bp) protein (160aa)

This feature has no annotations

L3_068_000M1_scaffold_1248_28
unknown

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26505..26723
DNA (219bp) protein (73aa)

This feature has no annotations

L3_068_000M1_scaffold_1248_29
unknown

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26699..26932
DNA (234bp) protein (78aa)

This feature has no annotations

L3_068_000M1_scaffold_1248_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26948..27418
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CGL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01440.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Displaying items 1-30 of 32 in total

View Taxonomy