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L3_068_000M1_scaffold_1353

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1353_1
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..266)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003125565
putative AAA-ATPase
AAA-ATPase-like protein {ECO:0000313|EMBL:AGY77283.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L3_068_000M1_scaffold_1353_2
unknown

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comp(347..754)
DNA (408bp) protein (136aa)

This feature has no annotations

L3_068_000M1_scaffold_1353_3
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(877..1551)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E0Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX86175.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L3_068_000M1_scaffold_1353_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1769..1942
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20125.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_068_000M1_scaffold_1353_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1943..2320
DNA (378bp) protein (126aa)
Death on curing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSK1_9CLOT
Death on curing protein {ECO:0000313|EMBL:EOR20124.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
death on curing protein
L3_068_000M1_scaffold_1353_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2381..2926)
DNA (546bp) protein (182aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
Probable RNA 2'-phosphotransferase n=3 Tax=Clostridium difficile RepID=T3CK92_CLODI
phosphotransferase KptA/Tpt1
L3_068_000M1_scaffold_1353_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3079..3750
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEM2_9CLOT
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CDM67979.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_068_000M1_scaffold_1353_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3813..4700)
DNA (888bp) protein (296aa)
NUDIX hydrolase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LV63_CLOB8
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABR34243.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_068_000M1_scaffold_1353_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4874..5065
DNA (192bp) protein (64aa)
UPI0003D592BB related cluster n=1 Tax=unknown RepID=UPI0003D592BB
Uncharacterized protein {ECO:0000313|EMBL:ETI89265.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_068_000M1_scaffold_1353_10
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5169..6752)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NLK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30023.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
membrane protein
L3_068_000M1_scaffold_1353_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6752..7468)
DNA (717bp) protein (239aa)
ABC transporter n=1 Tax=Clostridium intestinale URNW RepID=U2Q4J7_9CLOT
ABC transporter {ECO:0000313|EMBL:ERK31019.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter
L3_068_000M1_scaffold_1353_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7600..8835
DNA (1236bp) protein (412aa)
Aminotransferase, classes I and II family {ECO:0000313|EMBL:EEP54025.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEP54025.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dapL; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Aminotransferase, classes I and II family n=2 Tax=Clostridium butyricum RepID=C4IFP6_CLOBU
L3_068_000M1_scaffold_1353_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8982..9812
DNA (831bp) protein (277aa)
TPR domain protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6L1M3_9CLOT
TPR domain protein {ECO:0000313|EMBL:CDB76001.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
TPR repeat-containing protein
L3_068_000M1_scaffold_1353_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9889..10857)
DNA (969bp) protein (323aa)
Protein QmcA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP40_CLOSA
qmcA; protein QmcA
Protein QmcA {ECO:0000313|EMBL:AGX42293.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_1353_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10862..11293)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FSL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB15055.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
L3_068_000M1_scaffold_1353_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11652..13556
DNA (1905bp) protein (635aa)
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:EES50896.1}; EC=6.3.5.1 {ECO:0000313|EMBL:EES50896.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYN6_CLOBO
L3_068_000M1_scaffold_1353_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13723..15294
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3L1_9CLOT
DEAD/DEAH box helicase {ECO:0000313|EMBL:KJU72780.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_068_000M1_scaffold_1353_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15526..15789)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PXY5_9CLOT
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM68993.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_068_000M1_scaffold_1353_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15846..16388)
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCV3_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKY25793.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
N-acetyltransferase GCN5
L3_068_000M1_scaffold_1353_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16431..17066)
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0002EB1403
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CDH89687.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACD22931.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_068_000M1_scaffold_1353_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17453..18817)
DNA (1365bp) protein (455aa)
Na+-driven multidrug efflux pump n=2 Tax=Clostridium botulinum B RepID=B2TKE8_CLOBB
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:ACD24758.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH90501.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_068_000M1_scaffold_1353_22
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18940..20223)
DNA (1284bp) protein (428aa)
Transcriptional regulator-like protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVM1_CLOC7
transcriptional regulator-like protein
Transcriptional regulator-like protein {ECO:0000313|EMBL:ADL53082.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_068_000M1_scaffold_1353_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20282..21280)
DNA (999bp) protein (333aa)
Putative transcriptional regulator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LX98_9CLOT
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGF57875.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_068_000M1_scaffold_1353_24
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21364..22587)
DNA (1224bp) protein (408aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
RNA-splicing ligase RtcB n=1 Tax=Clostridium intestinale URNW RepID=U2NP76_9CLOT
hypothetical protein
L3_068_000M1_scaffold_1353_25
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22609..24051)
DNA (1443bp) protein (481aa)
TROVE domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LV85_CLOCD
Ribonucleoprotein {ECO:0000313|EMBL:GAE86690.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
TROVE domain-containing protein
L3_068_000M1_scaffold_1353_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24634..26172)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26910.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative AAA-ATPase
L3_068_000M1_scaffold_1353_27
unknown

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26796..26885
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 27 items

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