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L3_068_000M1_scaffold_1393

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1393_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..103)
DNA (102bp) protein (34aa)
N-carbamoylsarcosine amidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EK27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHF00742.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_068_000M1_scaffold_1393_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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553..2016
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72782.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_068_000M1_scaffold_1393_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2087..2290)
DNA (204bp) protein (68aa)
UPI0003D679CE related cluster n=1 Tax=unknown RepID=UPI0003D679CE
Uncharacterized protein {ECO:0000313|EMBL:ETI91985.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_068_000M1_scaffold_1393_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2307..3179)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4U2_9CLOT
mechanosensitive ion channel family protein
Uncharacterized protein {ECO:0000313|EMBL:EEH99662.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_068_000M1_scaffold_1393_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3197..3442)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1P5_9CLOT
hypothetical protein DUF3343
Uncharacterized protein {ECO:0000313|EMBL:AGF59545.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_068_000M1_scaffold_1393_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3628..4773
DNA (1146bp) protein (382aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1U2_CLOBA
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:KIL08341.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_068_000M1_scaffold_1393_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4832..5395
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C4L8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR24304.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
yyaC3; putative sporulation protein YyaC
L3_068_000M1_scaffold_1393_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5428..5940)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MY11_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45465.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_1393_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5997..6854)
DNA (858bp) protein (286aa)
ParB-like partition protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBK1_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:EHI96957.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
spo0J; stage 0 sporulation protein J
L3_068_000M1_scaffold_1393_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6865..7629)
DNA (765bp) protein (255aa)
Sporulation initiation inhibitor protein Soj n=4 Tax=Clostridium botulinum RepID=B2TRH6_CLOBB
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:AIY81454.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
sporulation initiation inhibitor protein soj
L3_068_000M1_scaffold_1393_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8089..8868)
DNA (780bp) protein (260aa)
Putative ParB-like partition protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUM8_9CLOT
noc; nucleoid occlusion protein
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KJU71785.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_068_000M1_scaffold_1393_12
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8964..9683)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
gidB; 16S rRNA methyltransferase GidB (EC:2.1.1.170)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium colicanis 209318 RepID=N9XKJ4_9CLOT
L3_068_000M1_scaffold_1393_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9696..11573)
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Clostridium botulinum RepID=UPI0003141044
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_068_000M1_scaffold_1393_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11586..12965)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium colicanis 209318 RepID=N9WB31_9CLOT
trmE; tRNA modification GTPase TrmE
L3_068_000M1_scaffold_1393_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13090..13713)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QH31_9CLOT
putative RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:AIY82669.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_068_000M1_scaffold_1393_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13755..14555)
DNA (801bp) protein (267aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U721_9CLOT
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EKQ57781.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
yidC; membrane insertase, YidC/Oxa1 family domain protein
L3_068_000M1_scaffold_1393_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14644..14811)
DNA (168bp) protein (56aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. L2-50 RepID=A7VDH9_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_068_000M1_scaffold_1393_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14828..15214)
DNA (387bp) protein (129aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Clostridium colicanis 209318 RepID=N9XX64_9CLOT
L3_068_000M1_scaffold_1393_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15273..15407)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EI53_CLOPA
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_068_000M1_scaffold_1393_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15934..17274
DNA (1341bp) protein (447aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TY26_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
dnaA; chromosomal replication initiation protein
L3_068_000M1_scaffold_1393_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17532..18632
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA polymerase III subunit beta n=1 Tax=Clostridium colicanis 209318 RepID=N9XW95_9CLOT
L3_068_000M1_scaffold_1393_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18677..18913
DNA (237bp) protein (79aa)
Putative S4 domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2V8_9CLOT
Putative S4 domain protein {ECO:0000313|EMBL:CDG02946.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
S4 domain-containing protein
L3_068_000M1_scaffold_1393_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18932..20017
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C2A9_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
recF; DNA replication and repair RecF family protein
L3_068_000M1_scaffold_1393_24
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20032..20292
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PQB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK28620.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_068_000M1_scaffold_1393_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20345..22252
DNA (1908bp) protein (636aa)
gyrB1; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
DNA gyrase subunit B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJV8_CLOSA
L3_068_000M1_scaffold_1393_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22274..24820
DNA (2547bp) protein (849aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
DNA gyrase subunit A n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUP4_9CLOT
DNA gyrase subunit A
L3_068_000M1_scaffold_1393_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25030..25485
DNA (456bp) protein (152aa)
Septicolysin n=2 Tax=Clostridium botulinum B RepID=B2TPZ2_CLOBB
septicolysin
Putative septicolysin-like protein {ECO:0000313|EMBL:CDH91988.1}; Septicolysin {ECO:0000313|EMBL:ACD21932.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying 27 items

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