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L3_068_000M1_scaffold_1530

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1530_1
unknown

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3..113
DNA (111bp) protein (37aa)

This feature has no annotations

L3_068_000M1_scaffold_1530_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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208..504
DNA (297bp) protein (99aa)
Putative CRS1/YhbY domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN08_9CLOT
Putative CRS1/YhbY domain protein {ECO:0000313|EMBL:CDG02577.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
CRS1 / YhbY domain protein
L3_068_000M1_scaffold_1530_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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507..1106
DNA (600bp) protein (200aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0F7_9CLOT
L3_068_000M1_scaffold_1530_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1113..1673
DNA (561bp) protein (187aa)
Putative HD superfamily hydrolase of NAD metabolism n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Y9_9CLOT
Putative HD superfamily hydrolase of NAD metabolism {ECO:0000313|EMBL:EKQ55118.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
HD domain protein
L3_068_000M1_scaffold_1530_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1698..3173
DNA (1476bp) protein (492aa)
Membrane-bound protein LytR n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0J3_9CLOT
Membrane-bound protein LytR {ECO:0000313|EMBL:EOR22827.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
membrane-bound protein LytR
L3_068_000M1_scaffold_1530_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3183..4082
DNA (900bp) protein (300aa)
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
RNA pseudouridine synthase YjbO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPP0_CLOSA
L3_068_000M1_scaffold_1530_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4099..5436)
DNA (1338bp) protein (446aa)
D-alanyl-D-alanine carboxypeptidase DacF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQF1_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:KJU71662.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
D-alanyl-D-alanine carboxypeptidase family protein
L3_068_000M1_scaffold_1530_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5595..6218
DNA (624bp) protein (208aa)
ComEA protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y4W6_9CLOT
ComEA protein {ECO:0000313|EMBL:ENZ03194.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
competence ComEA helix-hairpin-helix repeat region domain protein
L3_068_000M1_scaffold_1530_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6316..7050
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41664.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_1530_10
unknown

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7092..7310
DNA (219bp) protein (73aa)

This feature has no annotations

L3_068_000M1_scaffold_1530_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7337..8692
DNA (1356bp) protein (452aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EES47913.1}; EC=2.1.1.- {ECO:0000313|EMBL:EES47913.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium botulinum E RepID=B2V0B8_CLOBA
L3_068_000M1_scaffold_1530_12
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8995..9489
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPS2_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDE52652.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
acetyltransferase
L3_068_000M1_scaffold_1530_13
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9664..10779
DNA (1116bp) protein (372aa)
Methionine synthase II (Cobalamin-independent) n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PCE8_9FIRM
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:CDC18419.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Methionine synthase II (cobalamin-independent)
L3_068_000M1_scaffold_1530_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11012..11737
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIS9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97066.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
GntR family transcriptional regulator
L3_068_000M1_scaffold_1530_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11904..12326
DNA (423bp) protein (141aa)
Phosphonate C-P lyase system protein PhnG n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU31_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97069.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phosphonate C-P lyase system protein PhnG
L3_068_000M1_scaffold_1530_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12337..12921
DNA (585bp) protein (195aa)
Phosphonate C-P lyase system protein PhnH n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z926_CLOBU
PhnH protein {ECO:0000313|EMBL:KJZ83534.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphonate C-P lyase system protein PhnH
L3_068_000M1_scaffold_1530_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12927..14039
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8T1_CLOBU
PhnI protein {ECO:0000313|EMBL:KJZ83515.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative enzyme of phosphonate metabolism
L3_068_000M1_scaffold_1530_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14032..14877
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW48_CLOBU
PhnJ protein {ECO:0000313|EMBL:KJZ83523.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative enzyme of phosphonate metabolism
L3_068_000M1_scaffold_1530_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14870..15715
DNA (846bp) protein (282aa)
Phosphonate C-P lyase system protein PhnK n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIT2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97064.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC-type phosphonate transport system, ATPase component
L3_068_000M1_scaffold_1530_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15729..16904
DNA (1176bp) protein (392aa)
Phosphonate metabolism protein PhnM n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU35_CLOBU
Metal-dependent hydrolase involved in phosphonate metabolism {ECO:0000313|EMBL:KJZ83513.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphonate metabolism protein PhnM
L3_068_000M1_scaffold_1530_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16898..17638
DNA (741bp) protein (247aa)
Phosphonate ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z928_CLOBU
Phosphonates transport ATP-binding protein PhnL {ECO:0000313|EMBL:KJZ89330.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ABC-type phosphonate transport system, ATPase component
L3_068_000M1_scaffold_1530_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17640..18452
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8T6_CLOBU
Metal-dependent phosphoesterase {ECO:0000313|EMBL:KJZ89326.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative metal-dependent phosphoesterase, PHP family
L3_068_000M1_scaffold_1530_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18532..19617
DNA (1086bp) protein (362aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW51_CLOBU
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ENZ36252.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein
L3_068_000M1_scaffold_1530_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19639..20403
DNA (765bp) protein (255aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIT6_CLOBU
phosphonate ABC transporter, ATP-binding protein
L3_068_000M1_scaffold_1530_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20414..21199
DNA (786bp) protein (262aa)
Phosphonate ABC transporter, permease PhnE n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU38_CLOBU
Phosphonate ABC transporter permease protein phnE2 {ECO:0000313|EMBL:KJZ83529.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phnE; phosphonate ABC transporter, permease PhnE
L3_068_000M1_scaffold_1530_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21199..22047
DNA (849bp) protein (283aa)
ABC-type phosphate/phosphonate transport system, permease component n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRJ9_CLOSA
ABC-type phosphate/phosphonate transport system, permease component
ABC-type phosphate/phosphonate transport system, permease component {ECO:0000313|EMBL:AGX43384.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_068_000M1_scaffold_1530_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22257..23144
DNA (888bp) protein (296aa)
dapA3; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX95_CLOSA
L3_068_000M1_scaffold_1530_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23286..23771)
DNA (486bp) protein (162aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXC3_CLOSA
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AGX44107.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying 28 items

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