ggKbase home page

L3_068_000M1_scaffold_604

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_604_1
unknown

Not on your lists

comp(653..937)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_068_000M1_scaffold_604_2
unknown

Not on your lists

comp(1202..1633)
DNA (432bp) protein (144aa)

This feature has no annotations

L3_068_000M1_scaffold_604_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1660..2034)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ58202.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_068_000M1_scaffold_604_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2094..2651)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKW7_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
efp; translation elongation factor P
L3_068_000M1_scaffold_604_5
unknown

Not on your lists

comp(3110..3472)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_068_000M1_scaffold_604_6
unknown

Not on your lists

comp(3475..3867)
DNA (393bp) protein (131aa)

This feature has no annotations

L3_068_000M1_scaffold_604_7
unknown

Not on your lists

comp(3821..4171)
DNA (351bp) protein (117aa)

This feature has no annotations

L3_068_000M1_scaffold_604_8
unknown

Not on your lists

comp(4468..4863)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_068_000M1_scaffold_604_9
unknown

Not on your lists

comp(4838..5299)
DNA (462bp) protein (154aa)

This feature has no annotations

L3_068_000M1_scaffold_604_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5289..5735)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4T5_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL06859.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_068_000M1_scaffold_604_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5738..6190)
DNA (453bp) protein (151aa)
Prepilin-type N-cleavage/methylation domain protein n=2 Tax=Clostridium botulinum B RepID=B2TRP4_CLOBB
prepilin-type N-cleavage/methylation domain protein
Prepilin-type N-cleavage/methylation domain protein {ECO:0000313|EMBL:ACD23695.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH91331.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_068_000M1_scaffold_604_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6193..7218)
DNA (1026bp) protein (342aa)
pilus biogenesis protein n=1 Tax=Clostridium botulinum RepID=UPI0002E5C4EE
pilus biogenesis protein
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:AIY79103.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_068_000M1_scaffold_604_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7202..8563)
DNA (1362bp) protein (454aa)
Pilus biosynthesis protein TapB n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G006_CLOPA
Putative pilus biogenesis protein {ECO:0000313|EMBL:AJG98421.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
pulE; type II secretion system protein E
L3_068_000M1_scaffold_604_14
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8731..10017
DNA (1287bp) protein (429aa)
Transpeptidase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N571_CLOK5
hypothetical protein
Transpeptidase-related protein {ECO:0000313|EMBL:EDK32452.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L3_068_000M1_scaffold_604_15
unknown

Not on your lists

comp(10042..10317)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_068_000M1_scaffold_604_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10317..11813)
DNA (1497bp) protein (499aa)
Polyphosphate:AMP phosphotransferase (EC:2.7.4.-)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58897.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_068_000M1_scaffold_604_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11878..12102)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LP88_9CLOT
putative ribonuclease P protein component
Putative ribonuclease P protein component {ECO:0000313|EMBL:AIY83046.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_068_000M1_scaffold_604_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12161..13456)
DNA (1296bp) protein (432aa)
peptidase (EC:3.5.1.-)
Amidohydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPD3_9CLOT
Amidohydrolase {ECO:0000313|EMBL:EKY29570.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_068_000M1_scaffold_604_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13547..14212)
DNA (666bp) protein (222aa)
aliphatic sulfonates import ATP-binding protein SsuB (EC:3.6.3.-)
ABC transporter n=1 Tax=Clostridium botulinum RepID=UPI0002F723C0
ABC transporter {ECO:0000313|EMBL:KIL06771.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_068_000M1_scaffold_604_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14202..14963)
DNA (762bp) protein (254aa)
ABC transporter permease n=1 Tax=Clostridium botulinum RepID=UPI0002EDF585
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AIY81095.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
binding--dependent transport system inner membrane component family protein
L3_068_000M1_scaffold_604_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14941..15927)
DNA (987bp) protein (329aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN98_CLOSA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU72774.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
menaquinone biosynthesis family protein
L3_068_000M1_scaffold_604_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16118..18739
DNA (2622bp) protein (874aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPR1_9CLOT
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EKY29552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L3_068_000M1_scaffold_604_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18796..19926
DNA (1131bp) protein (377aa)
Putative DEAD/DEAH box helicase domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ELA3_9CLOT
Helicase {ECO:0000313|EMBL:KJU72666.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_068_000M1_scaffold_604_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19970..22306)
DNA (2337bp) protein (779aa)
Cell surface protein {ECO:0000313|EMBL:CCK99280.1}; EC=3.4.22.15 {ECO:0000313|EMBL:CCK99280.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Cell wall binding repeat 2 family protein n=8 Tax=Clostridium difficile RepID=T3BI34_CLODI
cwp84; cell surface-associated cysteine protease
L3_068_000M1_scaffold_604_25
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22336..23085)
DNA (750bp) protein (250aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP6_CLOP1
L3_068_000M1_scaffold_604_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23220..25169)
DNA (1950bp) protein (650aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DRP6_CLODI
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQF29066.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
htpG; Heat shock protein 90 (Heat shock proteinHtpG)(High temperature protein G)
L3_068_000M1_scaffold_604_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25406..26368)
DNA (963bp) protein (321aa)
Putative ROK family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F271_9CLOT
Putative ROK family protein {ECO:0000313|EMBL:CDG02716.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
glucokinase
L3_068_000M1_scaffold_604_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26497..27699)
DNA (1203bp) protein (401aa)
Threonyl and Alanyl tRNA synthetase second additional domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DD33_CLODI
Threonyl and Alanyl tRNA synthetase second additional domain protein {ECO:0000313|EMBL:EQF24341.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
threonyl and Alanyl tRNA synthetase second additional domain protein
L3_068_000M1_scaffold_604_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27744..29186)
DNA (1443bp) protein (481aa)
Transcriptional regulator, GntR family with aminotransferase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4C2_9CLOT
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:EHJ01263.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
transcriptional regulator, GntR family with aminotransferase domain containing protein
L3_068_000M1_scaffold_604_30
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29207..29929)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VY86_PAETH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET57869.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003).;"
Displaying items 1-30 of 50 in total

View Taxonomy