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L3_068_000M1_scaffold_4645

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_4645_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(275..3274)
DNA (3000bp) protein (1000aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
lacZ; beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4E4_9FIRM
L3_068_000M1_scaffold_4645_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3290..4687)
DNA (1398bp) protein (466aa)
Transporter, major facilitator family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX09_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERJ96615.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_068_000M1_scaffold_4645_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5028..5894
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDN1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERJ96616.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Transcriptional regulator, AraC family
L3_068_000M1_scaffold_4645_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5982..6650
DNA (669bp) protein (223aa)
Transposase mutator type n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UAI8_RUMA7
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ADU21316.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_068_000M1_scaffold_4645_5
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6779..7225)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00035D113F
transposase-like protein
Tax=GWA2_Deltaproteobacteria_47_9_curated
L3_068_000M1_scaffold_4645_6
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7713..8510)
DNA (798bp) protein (266aa)
Glycosyl hydrolase family 98 C-terminal domain./Glycosyl hydrolase family 98./Carbohydrate binding module (Family 6) n=1 Tax=Ruminococcus sp. CAG:379 RepID=R6ZYY6_9FIRM
Glycosyl hydrolase family 98 C-terminal domain./Glycosyl hydrolase family 98./Carbohydrate binding module (Family 6) {ECO:0000313|EMBL:CDD53753.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Glycosyl hydrolase family 98 C-terminal domain./Glycosyl hydrolase family 98./Carbohydrate binding module (family 6).
Displaying 6 items

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