ggKbase home page

L3_068_000M1_scaffold_2546

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2546_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

143..2509
DNA (2367bp) protein (789aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4K6_9FIRM
L3_068_000M1_scaffold_2546_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2513..3322
DNA (810bp) protein (270aa)
Amidohydrolase family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBK2_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:ERJ96678.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
amidohydrolase 2
L3_068_000M1_scaffold_2546_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3484..4902
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWL4_9FIRM
L3_068_000M1_scaffold_2546_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5039..5983)
DNA (945bp) protein (315aa)
Protein phosphatase 2C n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDT5_9FIRM
Protein phosphatase 2C {ECO:0000313|EMBL:ERJ96676.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
protein serine/threonine phosphatase
L3_068_000M1_scaffold_2546_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6189..6803)
DNA (615bp) protein (205aa)
DnaJ domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4K1_9FIRM
DnaJ domain protein {ECO:0000313|EMBL:ERJ96674.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_068_000M1_scaffold_2546_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6807..7634)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96673.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2546_7
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7638..8048)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6G9S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21100.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L3_068_000M1_scaffold_2546_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8347..8844
DNA (498bp) protein (166aa)
Hydrolase, NUDIX family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX52_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERJ96670.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
NUDIX hydrolase
L3_068_000M1_scaffold_2546_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9103..10083
DNA (981bp) protein (327aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4J4_9FIRM
Putative bactoprenol glucosyl transferase-like protein {ECO:0000313|EMBL:ERJ96669.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Glycosyltransferases involved in cell wall biogenesis
L3_068_000M1_scaffold_2546_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10084..11037
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96668.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2546_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11140..11640
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWK6_9FIRM
L3_068_000M1_scaffold_2546_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11683..12402
DNA (720bp) protein (240aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDS6_9FIRM
L3_068_000M1_scaffold_2546_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12406..13827
DNA (1422bp) protein (474aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Putative amidophosphoribosyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX48_9FIRM
L3_068_000M1_scaffold_2546_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13824..15263
DNA (1440bp) protein (480aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
purF; Amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4J0_9FIRM
Displaying 14 items

View Taxonomy