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L3_068_000M1_scaffold_2561

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2561_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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464..1600
DNA (1137bp) protein (379aa)
sialate O-acetylesterase (EC:3.1.1.53)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JLT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87216.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2561_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1625..1966
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JLT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87216.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
sialate O-acetylesterase
L3_068_000M1_scaffold_2561_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1990..2358
DNA (369bp) protein (123aa)
Beta-mannanase (EC:3.2.1.78)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K4M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87217.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2561_4
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2529..2969)
DNA (441bp) protein (147aa)
N-acetyltransferase GCN5 n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B60C96
Uncharacterized protein {ECO:0000313|EMBL:EWM53190.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_068_000M1_scaffold_2561_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3378..3860)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87223.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2561_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4446..5768
DNA (1323bp) protein (441aa)
Putative substrate-binding protein MsmE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K535_9FIRM
Putative substrate-binding protein MsmE {ECO:0000313|EMBL:ERJ87225.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2561_7
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5800..6669
DNA (870bp) protein (290aa)
Transmembrane permease MsmF n=2 Tax=Ruminococcus RepID=R7FFY3_9FIRM
Transmembrane permease MsmF {ECO:0000313|EMBL:CDE13413.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2561_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6641..7492
DNA (852bp) protein (284aa)
Putative transmembrane permease MsmG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K4N1_9FIRM
Putative transmembrane permease MsmG {ECO:0000313|EMBL:ERJ87227.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2561_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7496..8590
DNA (1095bp) protein (365aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJE4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ87228.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_068_000M1_scaffold_2561_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8604..9902
DNA (1299bp) protein (433aa)
beta-fructofuranosidase (EC:3.2.1.26)
Glycosyl hydrolase family 32 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LCM8_9FIRM
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:ERJ87229.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2561_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10558..11082
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JLQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87186.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2561_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11330..12355)
DNA (1026bp) protein (342aa)
Sugar-binding domain protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJB1_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:ERJ87188.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
transcriptional regulator, LacI family
L3_068_000M1_scaffold_2561_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12680..14089
DNA (1410bp) protein (470aa)
Sucrose phosphorylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K4H6_9FIRM
Sucrose phosphorylase {ECO:0000313|EMBL:ERJ87162.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
alpha amylase catalytic domain-containing protein
L3_068_000M1_scaffold_2561_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14100..15077
DNA (978bp) protein (326aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJ93_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:ERJ87163.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Displaying 14 items

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