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L3_068_000M1_scaffold_2698

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2698_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(97..594)
DNA (498bp) protein (166aa)
HD domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS70_9FIRM
HD domain protein {ECO:0000313|EMBL:ERJ89963.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
HD family phosphohydrolase
L3_068_000M1_scaffold_2698_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(691..1719)
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JUK5_9FIRM
L3_068_000M1_scaffold_2698_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1879..3165)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89960.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2698_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3223..4083)
DNA (861bp) protein (287aa)
PHP domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKD3_9FIRM
PHP domain protein {ECO:0000313|EMBL:ERJ89959.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphotransferase domain-containing protein
L3_068_000M1_scaffold_2698_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4080..5237)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89958.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_2698_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5247..6623)
DNA (1377bp) protein (459aa)
MBOAT family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCH9_9FIRM
MBOAT family protein {ECO:0000313|EMBL:ERJ89957.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein involved in D-alanine export
L3_068_000M1_scaffold_2698_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6639..7214)
DNA (576bp) protein (192aa)
RNAse M5 (EC:3.1.26.8)
Putative ribonuclease M5 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JUK0_9FIRM
Putative ribonuclease M5 {ECO:0000313|EMBL:ERJ89956.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2698_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7183..8262)
DNA (1080bp) protein (360aa)
DNA polymerase III, delta subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCV4_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ERJ89955.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA polymerase III, delta subunit
L3_068_000M1_scaffold_2698_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8360..10426)
DNA (2067bp) protein (689aa)
ComEC/Rec2-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS60_9FIRM
ComEC/Rec2-like protein {ECO:0000313|EMBL:ERJ89953.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
possible DNA uptake protein
L3_068_000M1_scaffold_2698_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10440..10982)
DNA (543bp) protein (181aa)
Phosphoribosyl transferase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCH5_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:ERJ89952.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphoribosyltransferase
L3_068_000M1_scaffold_2698_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10996..11358)
DNA (363bp) protein (121aa)
Histidine triad domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JUJ3_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:ERJ89951.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_068_000M1_scaffold_2698_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11361..14006)
DNA (2646bp) protein (882aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCU8_9FIRM
Displaying 12 items

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