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L3_068_000M1_scaffold_2968

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2968_1
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(39..260)
DNA (222bp) protein (74aa)
Phage/plasmid primase P4 family C-terminal domain protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H3N4_9FIRM
Phage/plasmid primase P4 family C-terminal domain protein {ECO:0000313|EMBL:CDE33980.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
L3_068_000M1_scaffold_2968_2
unknown

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422..793
DNA (372bp) protein (124aa)

This feature has no annotations

L3_068_000M1_scaffold_2968_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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809..4057
DNA (3249bp) protein (1083aa)
Tetratricopeptide repeat protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA63_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERJ96203.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
NB-ARC domain./Protein kinase domain.
L3_068_000M1_scaffold_2968_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4406..6052
DNA (1647bp) protein (549aa)
Divergent AAA domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M371_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:ERJ96204.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
divergent AAA domain protein
L3_068_000M1_scaffold_2968_5
unknown

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6184..6327
DNA (144bp) protein (48aa)

This feature has no annotations

L3_068_000M1_scaffold_2968_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6303..6587
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97416.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2968_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6564..7097)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037F30A1
Transposase {ECO:0000313|EMBL:EWM11617.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase
L3_068_000M1_scaffold_2968_8
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7094..7555)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQY1_9FIRM
transposase
Transposase {ECO:0000313|EMBL:AHF10427.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_068_000M1_scaffold_2968_9
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7850..8950
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C9Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA72400.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
ROK family protein
L3_068_000M1_scaffold_2968_10
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9186..10211
DNA (1026bp) protein (342aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.103 1.1.1.14)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D3Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA72402.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_068_000M1_scaffold_2968_11
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10233..11603
DNA (1371bp) protein (457aa)
Sodium:glactoside symporter family protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C9Y5_9FIRM
Sodium:glactoside symporter family protein {ECO:0000313|EMBL:CDA72405.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_068_000M1_scaffold_2968_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11596..12558
DNA (963bp) protein (321aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Putative fructokinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5A2_9FIRM
Putative fructokinase {ECO:0000313|EMBL:ERJ87447.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_2968_13
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12561..12953
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase family protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4B6_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:CDE33813.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
Displaying 13 items

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