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L3_068_000M1_scaffold_3319

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3319_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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102..239
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JLF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87061.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_3319_2
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(513..1241)
DNA (729bp) protein (243aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacillus cereus VDM019 RepID=R8EKM9_BACCE
hypothetical protein
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:EGD48327.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L3_068_000M1_scaffold_3319_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1262..2335)
DNA (1074bp) protein (358aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LEW1_9FIRM
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERJ87994.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glycosyl transferase
L3_068_000M1_scaffold_3319_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3356..5248
DNA (1893bp) protein (631aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Beta-1,4-xylanase (EC:3.2.1.8)
Glycosyl hydrolase family 10 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKX6_9FIRM
L3_068_000M1_scaffold_3319_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5631..5990)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JNE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87786.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_3319_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6524..9328)
DNA (2805bp) protein (935aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6Q4_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:ERJ87785.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Beta-galactosidase/beta-glucuronidase
L3_068_000M1_scaffold_3319_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10170..11072)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LEB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87814.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_3319_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11108..11554)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LEE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87839.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_3319_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12137..13123)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JX57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ90876.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA replication protein
L3_068_000M1_scaffold_3319_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13840..14736)
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KF40_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:ERJ90877.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LysR family transcriptional regulator
Displaying 10 items

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