ggKbase home page

L3_068_000M1_scaffold_1853

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1853_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

268..1575
DNA (1308bp) protein (436aa)
Amino acid carrier protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M7B3_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:ERJ95223.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
amino acid carrier protein
L3_068_000M1_scaffold_1853_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1808..2836)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95246.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_1853_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3457..4752)
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M0H4_9FIRM
L3_068_000M1_scaffold_1853_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5013..5690)
DNA (678bp) protein (226aa)
Methyltransferase, YaeB family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSH9_9FIRM
Methyltransferase, YaeB family {ECO:0000313|EMBL:ERJ95242.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
methyltransferase, YaeB/AF_0241 family
L3_068_000M1_scaffold_1853_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5732..6400)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95241.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter permease
L3_068_000M1_scaffold_1853_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6397..7260)
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KT34_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ95240.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter
L3_068_000M1_scaffold_1853_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7263..7640)
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M0H0_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERJ95239.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GntR family transcriptional regulator
L3_068_000M1_scaffold_1853_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7908..10304
DNA (2397bp) protein (799aa)
chitobiose phosphorylase (EC:2.4.1.-)
Glycosyltransferase family 36 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M7C7_9FIRM
Glycosyltransferase family 36 {ECO:0000313|EMBL:ERJ95238.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_1853_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10474..11004
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95237.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_1853_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11055..12179)
DNA (1125bp) protein (375aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9P9_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ95236.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Dockerin type I repeat.
L3_068_000M1_scaffold_1853_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12526..13467)
DNA (942bp) protein (314aa)
vanY1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M0G7_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERJ95234.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_1853_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13492..14823)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M7C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95233.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_1853_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..15422)
DNA (603bp) protein (201aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSH0_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ERJ95232.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
RNA polymerase sigma factor
L3_068_000M1_scaffold_1853_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15511..17223)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95231.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Ig-like domain-containing surface protein
L3_068_000M1_scaffold_1853_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17261..18733)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KT25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95230.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_1853_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18730..19995)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M0G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95229.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_1853_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20017..21837)
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M7B8_9FIRM
glucosamine--fructose-6-phosphate aminotransferase
Displaying 17 items

View Taxonomy