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L3_068_000M1_scaffold_595

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_595_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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755..1018
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96307.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_2
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1277..2407
DNA (1131bp) protein (377aa)
Cobalamin synthesis protein P47K n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FF02_9FIRM
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:EWM53438.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Putative GTPases (G3E family)
L3_068_000M1_scaffold_595_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2423..3391
DNA (969bp) protein (323aa)
TIGR03943 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWC3_9FIRM
TIGR03943 family protein {ECO:0000313|EMBL:ERJ93784.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_068_000M1_scaffold_595_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3740..4486
DNA (747bp) protein (249aa)
Putative delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M368_9FIRM
Putative delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:ERJ93783.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted xylanase/chitin deacetylase
L3_068_000M1_scaffold_595_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4784..6073
DNA (1290bp) protein (430aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNB8_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ERJ93782.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6186..7373
DNA (1188bp) protein (396aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNY3_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:ERJ93780.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7363..7776
DNA (414bp) protein (138aa)
NifU-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M363_9FIRM
NifU-like protein {ECO:0000313|EMBL:ERJ93778.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L3_068_000M1_scaffold_595_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7790..9064
DNA (1275bp) protein (425aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNB4_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ93777.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9152..9643)
DNA (492bp) protein (164aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
aroK; Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5J6_9FIRM
L3_068_000M1_scaffold_595_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9652..10491)
DNA (840bp) protein (280aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
aroE; Shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNX8_9FIRM
L3_068_000M1_scaffold_595_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10491..11402)
DNA (912bp) protein (304aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWB4_9FIRM
malonyl CoA-acyl carrier protein transacylase
L3_068_000M1_scaffold_595_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11679..12686
DNA (1008bp) protein (336aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fabH; beta-ketoacyl-acyl-carrier-protein synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5J2_9FIRM
L3_068_000M1_scaffold_595_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12721..13647
DNA (927bp) protein (309aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNX5_9FIRM
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:ERJ93770.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13698..14438
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWA9_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ERJ93769.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14564..15802
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M353_9FIRM
L3_068_000M1_scaffold_595_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15815..16291
DNA (477bp) protein (159aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNA7_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ERJ93767.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fabE; acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_068_000M1_scaffold_595_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16304..16741
DNA (438bp) protein (146aa)
fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5I8_9FIRM
(3R)-hydroxymyristoyl-ACP dehydratase {ECO:0000313|EMBL:ERJ93766.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16754..18127
DNA (1374bp) protein (458aa)
accC1; Biotin carboxylase 1 (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNX1_9FIRM
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:ERJ93765.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18142..19002
DNA (861bp) protein (287aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWA5_9FIRM
L3_068_000M1_scaffold_595_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19005..19823
DNA (819bp) protein (273aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M347_9FIRM
L3_068_000M1_scaffold_595_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19924..20163
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNA2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
acpP; Acyl carrier protein
L3_068_000M1_scaffold_595_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20439..21215
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5I2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
lipopolysaccharide transport system permease
L3_068_000M1_scaffold_595_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21215..22582
DNA (1368bp) protein (456aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWA0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ93759.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
lipopolysaccharide transport system ATP-binding protein
L3_068_000M1_scaffold_595_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22589..23638
DNA (1050bp) protein (350aa)
Methyltransferase, FkbM family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M341_9FIRM
Methyltransferase, FkbM family {ECO:0000313|EMBL:ERJ93758.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SAM-dependent methyltransferase
L3_068_000M1_scaffold_595_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23654..24145
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KN97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93757.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24142..25242
DNA (1101bp) protein (367aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5H7_9FIRM
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERJ93756.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Glycosyltransferase
L3_068_000M1_scaffold_595_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25566..26753
DNA (1188bp) protein (396aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LW94_9FIRM
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERJ93754.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative glycosyltransferase
L3_068_000M1_scaffold_595_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26758..27951
DNA (1194bp) protein (398aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M336_9FIRM
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERJ93753.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Hexosyltransferase
L3_068_000M1_scaffold_595_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27985..30486
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KN93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93752.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_068_000M1_scaffold_595_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30521..31519
DNA (999bp) protein (333aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5H3_9FIRM
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERJ93751.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
family 2 glycosyl transferase
Displaying items 1-30 of 50 in total

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