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L3_068_000M1_scaffold_1692_11

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(11797..12534)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 486
  • Evalue 1.50e-134
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 245.0
  • Bit_score: 298
  • Evalue 1.60e-78
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX16_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 486
  • Evalue 1.10e-134

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
GTGAGAAATCTGAAAGTAACAATGGGCTTTCGCGGAACCAATTACCACGGGTTTCAGCGGCAGCCCAACGGCATCACTGTGCAGGAAGTGGTGGAAACAGCACTGTCACAGCTGTTCAACGAGCCGGTGACCATACAGGGCTGCTCCAGAACAGACACCGGCGTGCATGCCAAGGAGTACTGCTTCACCATGCAGACGGAAAAACAGCTGCCGGAACGGAATTTCATTCGGGGAGCCTGCGGGTATCTGCCGGAGGATATTTCCATTTATCGGGTGGAGGAAATGCCGCCGGAGTTTCATGCACGGTTCAGCTGCAAGGCAAAGGAATATATGTACCGGATCCATAACAGCGAAAGCAAGAATCCGTTTACCACCGATCTGGAATTGCTCTATCGGCGGAAAATGGATATTCCGCTGATGCAGGAGGCGGCACAGCACTTTGTGGGCACCCACGACTTTGCAACGTTTTGTACAAATTACACAGAAAAACAGAATACCATTCGTACAATCCACGACATAACCATAGAAAAGCAAGGAAATACCGTGATTCTGCTTGTCAAAGGCAATGGTTTTTTGTATAATATGGTTAGGATACTGGTGGGGACGCTGTTGAGTGTCAACGAGGGAAGAATCGCCGTTTCCGAACTGGACGACCTTCTGGCATCTAAAAATCGTGTCCTCGCCGGAATCACCGCACAGGCACATGGACTGTACCTGAATCGGGTGTTTTATGAATAA
PROTEIN sequence
Length: 246
VRNLKVTMGFRGTNYHGFQRQPNGITVQEVVETALSQLFNEPVTIQGCSRTDTGVHAKEYCFTMQTEKQLPERNFIRGACGYLPEDISIYRVEEMPPEFHARFSCKAKEYMYRIHNSESKNPFTTDLELLYRRKMDIPLMQEAAQHFVGTHDFATFCTNYTEKQNTIRTIHDITIEKQGNTVILLVKGNGFLYNMVRILVGTLLSVNEGRIAVSELDDLLASKNRVLAGITAQAHGLYLNRVFYE*