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L3_068_000M1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_174_1
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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618..1061
DNA (444bp) protein (148aa)
Ribose/galactose isomerase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN89_9PROT
Ribose/galactose isomerase {ECO:0000313|EMBL:CCZ30093.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ribose 5-phosphate isomerase
L3_068_000M1_scaffold_174_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

1052..2314
DNA (1263bp) protein (421aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
glyA; serine hydroxymethyl transferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RB30_9PROT
L3_068_000M1_scaffold_174_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(2497..3219)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R615_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30091.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

3459..4778
DNA (1320bp) protein (440aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMY5_9PROT
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
L3_068_000M1_scaffold_174_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

4783..5256
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUU5_9PROT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
nrdR; transcriptional regulator NrdR
L3_068_000M1_scaffold_174_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

5287..5739
DNA (453bp) protein (151aa)
N utilization substance protein B homolog n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN85_9PROT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
NusB antitermination factor
L3_068_000M1_scaffold_174_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

5769..6296
DNA (528bp) protein (176aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Peptide deformylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RB26_9PROT
polypeptide deformylase
L3_068_000M1_scaffold_174_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6384..7301
DNA (918bp) protein (306aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Methionyl-tRNA formyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R610_9PROT
methionyl-tRNA formyltransferase
L3_068_000M1_scaffold_174_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(7349..8329)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMX8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30085.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(8488..9198)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUU3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30084.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(9262..9555)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN81_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30083.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

9775..10935
DNA (1161bp) protein (387aa)
Periplasmic component of efflux system n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RB22_9PROT
Periplasmic component of efflux system {ECO:0000313|EMBL:CCZ30082.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
periplasmic component of efflux system
L3_068_000M1_scaffold_174_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

10935..11669
DNA (735bp) protein (245aa)
ABC transporter related n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R605_9PROT
ABC transporter related {ECO:0000313|EMBL:CCZ30081.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ABC transporter-like protein
L3_068_000M1_scaffold_174_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

11666..12895
DNA (1230bp) protein (410aa)
Export ABC transporter permease protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMX5_9PROT
Export ABC transporter permease protein {ECO:0000313|EMBL:CCZ30080.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
export ABC transporter permease
L3_068_000M1_scaffold_174_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(12944..13921)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUT9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30079.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14065..15006)
DNA (942bp) protein (314aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Thioredoxin reductase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN76_9PROT
thioredoxin reductase
L3_068_000M1_scaffold_174_17
unknown

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15107..15472
DNA (366bp) protein (122aa)

This feature has no annotations

L3_068_000M1_scaffold_174_18
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(15469..15942)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R602_9PROT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
greA; transcription elongation factor GreA
L3_068_000M1_scaffold_174_19
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

16169..16633
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMX2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30075.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_068_000M1_scaffold_174_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

16705..18507
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUT6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30074.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_068_000M1_scaffold_174_21
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(18537..19289)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RB15_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30072.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_22
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

19414..19866
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R5Z7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30071.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
protein GatB
L3_068_000M1_scaffold_174_23
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

19939..21792
DNA (1854bp) protein (618aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
DNA primase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMW7_9PROT
DNA primase
L3_068_000M1_scaffold_174_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

21953..24046
DNA (2094bp) protein (698aa)
RNA polymerase sigma factor RpoD n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUT4_9PROT
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
RNA polymerase sigma factor RpoD
L3_068_000M1_scaffold_174_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

24192..25085
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QN68_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30068.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_26
unknown

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comp(24987..25196)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_068_000M1_scaffold_174_27
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

25230..25721
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RB13_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30067.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_28
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

25737..26135
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R5Z2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30066.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_068_000M1_scaffold_174_29
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

26162..26665
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QMW3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30065.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_068_000M1_scaffold_174_30
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

26736..27158
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUT0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30064.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Displaying items 1-30 of 260 in total

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