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L3_068_000M1_scaffold_1255

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1255_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

2..556
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HID0_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24542.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(800..1285)
DNA (486bp) protein (162aa)
Heat shock protein Hsp20 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJ90_9SPIR
Heat shock protein Hsp20 {ECO:0000313|EMBL:CCY24892.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
heat shock protein Hsp20
L3_068_000M1_scaffold_1255_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

1437..2465
DNA (1029bp) protein (343aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJJ9_9SPIR
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CCY24891.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
putative lactate dehydrogenase
L3_068_000M1_scaffold_1255_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

2485..3819
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5B9_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24890.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
L3_068_000M1_scaffold_1255_5
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

3806..4345
DNA (540bp) protein (180aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium sp. CAG:967 RepID=R5K728_9CLOT
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
membrane protein
L3_068_000M1_scaffold_1255_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(4313..5287)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5V2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24888.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_068_000M1_scaffold_1255_7
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5488..6279)
DNA (792bp) protein (264aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJJ4_9SPIR
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_068_000M1_scaffold_1255_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists


comp(6337..7173)
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5B4_9SPIR
L3_068_000M1_scaffold_1255_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

7204..8592
DNA (1389bp) protein (463aa)
glutamate/cysteine ligase (EC:6.3.2.2)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9U8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24884.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_10
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

8993..9196
DNA (204bp) protein (68aa)
hypothetical protein id=151633 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX79854.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
L3_068_000M1_scaffold_1255_11
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

9263..9613
DNA (351bp) protein (117aa)
High light inducible protein n=1 Tax=Clostridium sp. CAG:729 RepID=R7LJV4_9CLOT
High light inducible protein {ECO:0000313|EMBL:CDE88925.1}; TaxID=1262835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
sigma 54 modulation protein/ribosomal protein S30EA
L3_068_000M1_scaffold_1255_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

9620..10405
DNA (786bp) protein (262aa)
Glycosyltransferase family 2 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5C5_9SPIR
Glycosyltransferase family 2 {ECO:0000313|EMBL:CCY24895.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
family glycosyltransferase
L3_068_000M1_scaffold_1255_13
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

10650..10880
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HXP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE44474.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
L3_068_000M1_scaffold_1255_14
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(11219..12076)
DNA (858bp) protein (286aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5KN86_9CLOT
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:CCY62556.1}; TaxID=1262849 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
PBS lyase HEAT domain protein repeat-containing protein
L3_068_000M1_scaffold_1255_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(12437..14095)
DNA (1659bp) protein (553aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5X0_9SPIR
histidine kinase,histidine kinase,GAF domain-containing protein
L3_068_000M1_scaffold_1255_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14313..15191)
DNA (879bp) protein (293aa)
DNA polymerase III delta' subunit n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H9W8_9SPIR
DNA polymerase III delta' subunit {ECO:0000313|EMBL:CCY24904.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
DNA polymerase III subunit delta'
L3_068_000M1_scaffold_1255_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(15175..16212)
DNA (1038bp) protein (346aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H5D5_9SPIR
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCY24905.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_18
unknown

Not on your lists

16231..16839
DNA (609bp) protein (203aa)

This feature has no annotations

L3_068_000M1_scaffold_1255_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16867..17820)
DNA (954bp) protein (318aa)
ROK family glucokinase (EC:2.7.1.2)
Glucokinase ROK family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HJL3_9SPIR
Glucokinase ROK family {ECO:0000313|EMBL:CCY24906.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17943..19793
DNA (1851bp) protein (617aa)
Glycosyl hydrolase family 57 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2F6_9SPIR
Glycosyl hydrolase family 57 {ECO:0000313|EMBL:CCY23875.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
glycosyl hydrolase family protein
L3_068_000M1_scaffold_1255_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

19742..20107
DNA (366bp) protein (122aa)
Glycosyl hydrolase family 57 n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2F6_9SPIR
Glycosyl hydrolase family 57 {ECO:0000313|EMBL:CCY23875.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_22
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

20246..20428
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGM9_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23876.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_23
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(20487..20924)
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H340_9SPIR
L3_068_000M1_scaffold_1255_24
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists


comp(21310..23913)
DNA (2604bp) protein (868aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGN5_9SPIR
L3_068_000M1_scaffold_1255_25
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(23988..24734)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGE1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23882.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L3_068_000M1_scaffold_1255_26
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

24866..25195
DNA (330bp) protein (110aa)
Transcriptional regulator XRE family n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H345_9SPIR
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCY23883.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
XRE family transcriptional regulator
L3_068_000M1_scaffold_1255_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

25252..26241
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H2G7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23885.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
glycosyl transferase GT2 family
L3_068_000M1_scaffold_1255_28
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26238..27119
DNA (882bp) protein (294aa)
Glycosyltransferases probably involved in cell wall biogenesis n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HGP0_9SPIR
Glycosyltransferases probably involved in cell wall biogenesis {ECO:0000313|EMBL:CCY23886.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_068_000M1_scaffold_1255_29
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

comp(27577..28941)
DNA (1365bp) protein (455aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN31_TRIVA
TPR domain-containing protein
Tax=GWF2_Melainabacteria_32_7_curated
L3_068_000M1_scaffold_1255_30
unknown

Not on your lists

comp(29036..29431)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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