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L3_068_000M1_scaffold_2268

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2268_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1457
DNA (1455bp) protein (485aa)
ATP-dependent chaperone ClpB n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVN2_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ATP-dependent chaperone ClpB
L3_068_000M1_scaffold_2268_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1527..1658)
DNA (132bp) protein (44aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXB8_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDE80436.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2268_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1877..3592)
DNA (1716bp) protein (572aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXI9_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:CDE80438.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
conserved hypothetical protein
L3_068_000M1_scaffold_2268_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3895..4194
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80440.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2268_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4203..4967)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80441.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_2268_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5195..5725
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80442.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2268_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8691..8981)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXJ3_9FIRM
cas2; CRISPR-associated protein Cas2
L3_068_000M1_scaffold_2268_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8992..9987)
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVJ1_9FIRM
cas1; CRISPR-associated endonuclease Cas1
L3_068_000M1_scaffold_2268_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10011..10682)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80445.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cas4; CRISPR-associated protein Cas4
L3_068_000M1_scaffold_2268_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10679..11545)
DNA (867bp) protein (289aa)
CRISPR-associated protein Csd2 family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXC9_9FIRM
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:CDE80446.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cas_csd2; CRISPR-associated protein, Csd2 family
L3_068_000M1_scaffold_2268_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11564..13414)
DNA (1851bp) protein (617aa)
Crispr-protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZR0_9FIRM
Crispr-protein {ECO:0000313|EMBL:CDE80447.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cas_csd1; CRISPR-associated protein, Csd1 family
L3_068_000M1_scaffold_2268_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13408..14130)
DNA (723bp) protein (241aa)
CRISPR-associated protein Cas5 Dvulg subtype n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXJ7_9FIRM
CRISPR-associated protein Cas5 Dvulg subtype {ECO:0000313|EMBL:CDE80448.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cas5; CRISPR-associated protein Cas5, Dvulg subtype
L3_068_000M1_scaffold_2268_13
unknown

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comp(14132..14281)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_068_000M1_scaffold_2268_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14394..16628)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80449.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cas3; CRISPR-associated helicase Cas3
Displaying 14 items

View Taxonomy