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L3_068_000M1_scaffold_2384

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2384_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(204..854)
DNA (651bp) protein (217aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KWQ4_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDE79387.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_2384_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(856..1566)
DNA (711bp) protein (237aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSJ1_9FIRM
Phosphonate-transporting ATPase {ECO:0000313|EMBL:CDE79389.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2384_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1583..2341)
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUB6_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDE79391.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC transporter
L3_068_000M1_scaffold_2384_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2338..3435)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79393.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
livM; branched-chain amino acid ABC transporter permease LivM
L3_068_000M1_scaffold_2384_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3448..4347)
DNA (900bp) protein (300aa)
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSJ5_9FIRM
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CDE79394.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)
L3_068_000M1_scaffold_2384_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4554..5741)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79395.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L3_068_000M1_scaffold_2384_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6094..6423)
DNA (330bp) protein (110aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KWR3_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CDE79397.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
branched-chain amino acid transport
L3_068_000M1_scaffold_2384_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6439..7161)
DNA (723bp) protein (241aa)
Branched-chain amino acid transporter AzlC n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSK0_9FIRM
Branched-chain amino acid transporter AzlC {ECO:0000313|EMBL:CDE79399.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
branched-chain amino acid transporter AzlC
L3_068_000M1_scaffold_2384_9
unknown

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7163..7390
DNA (228bp) protein (76aa)

This feature has no annotations

L3_068_000M1_scaffold_2384_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7413..8777
DNA (1365bp) protein (455aa)
MatE efflux family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUC5_9FIRM
MatE efflux family protein {ECO:0000313|EMBL:CDE79401.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
MatE efflux family protein
L3_068_000M1_scaffold_2384_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8774..9568
DNA (795bp) protein (265aa)
LPS:glycosyltransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSK5_9FIRM
LPS:glycosyltransferase {ECO:0000313|EMBL:CDE79404.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
LPS:glycosyltransferase
L3_068_000M1_scaffold_2384_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9531..10406
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79406.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2384_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10430..11785
DNA (1356bp) protein (452aa)
TrkA-N domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUJ0_9FIRM
TrkA-N domain protein {ECO:0000313|EMBL:CDE79408.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
TrkA-N domain-containing protein
L3_068_000M1_scaffold_2384_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11828..13261
DNA (1434bp) protein (478aa)
Trk system potassium uptake protein TrkH n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSS8_9FIRM
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:CDE79410.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Trk-type K+ transport systems, membrane components
L3_068_000M1_scaffold_2384_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13314..13616
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KWS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79412.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2384_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14001..15275
DNA (1275bp) protein (425aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSL4_9FIRM
L3_068_000M1_scaffold_2384_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15435..16298)
DNA (864bp) protein (288aa)
Chaperone protein HtpG n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUD9_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Molecular chaperone, HSP90 family
Displaying 17 items

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