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L3_068_000M1_scaffold_2862

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2862_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1175
DNA (1173bp) protein (391aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSL7_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDE79340.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_2862_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1341..2543)
DNA (1203bp) protein (401aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
dapL; LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L246_9FIRM
L3_068_000M1_scaffold_2862_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2562..3398)
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L000_9FIRM
L3_068_000M1_scaffold_2862_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3416..3991)
DNA (576bp) protein (192aa)
ANTAR domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXX5_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:CDE81259.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
response regulator receiver and ANTAR domain protein
L3_068_000M1_scaffold_2862_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4116..4838)
DNA (723bp) protein (241aa)
Glutamate synthase alpha subunit domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KY13_9FIRM
Glutamate synthase alpha subunit domain protein {ECO:0000313|EMBL:CDE81260.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
glutamate synthase family protein
L3_068_000M1_scaffold_2862_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4831..6078)
DNA (1248bp) protein (416aa)
NAD(P)H-nitrite reductase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZR6_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:CDE81261.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
NAD(P)H-nitrite reductase
L3_068_000M1_scaffold_2862_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6075..6527)
DNA (453bp) protein (151aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L250_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE81262.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Fe-S-cluster-containing hydrogenase components 2
L3_068_000M1_scaffold_2862_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6563..8068)
DNA (1506bp) protein (502aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L005_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE81263.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
glutamate synthase family protein
L3_068_000M1_scaffold_2862_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8059..9174)
DNA (1116bp) protein (372aa)
glutamate synthase (NADPH) GltB1 subunit (EC:1.4.1.13)
Glutamate synthase (NADPH) GltB1 subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXX9_9FIRM
Glutamate synthase (NADPH) GltB1 subunit {ECO:0000313|EMBL:CDE81264.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2862_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10258..10860
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KY17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81265.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2862_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11047..13404
DNA (2358bp) protein (786aa)
Glycoside Hydrolase Family 31 protein (EC:3.2.1.-)
Glycosyl hydrolase family 31 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZR9_9FIRM
Glycosyl hydrolase family 31 {ECO:0000313|EMBL:CDE81266.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Displaying 11 items

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