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L3_068_000M1_scaffold_2934

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2934_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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127..1314
DNA (1188bp) protein (396aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81547.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_2934_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1430..2500
DNA (1071bp) protein (357aa)
DnaD and phage-associated domain n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0I0_9FIRM
DnaD and phage-associated domain {ECO:0000313|EMBL:CDE81546.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
DnaD and phage-associated domain
L3_068_000M1_scaffold_2934_3
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2558..3499
DNA (942bp) protein (314aa)
DNA replication protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCV3_RUMC1
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:CBL17448.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_068_000M1_scaffold_2934_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3798..4580
DNA (783bp) protein (261aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0H5_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
spo0A; Stage 0 sporulation protein A homolog
L3_068_000M1_scaffold_2934_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4778..5866)
DNA (1089bp) protein (363aa)
Transporter major facilitator family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYS5_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDE81540.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_2934_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6250..8205
DNA (1956bp) protein (652aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
metG; Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYN3_9FIRM
L3_068_000M1_scaffold_2934_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8365..8916)
DNA (552bp) protein (184aa)
Rubredoxin/rubrerythrin n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0N0_9FIRM
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:CDE81538.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
rubredoxin/rubrerythrin
L3_068_000M1_scaffold_2934_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9103..10002)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L2U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81537.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Carbohydrate Esterase Family 4 protein
L3_068_000M1_scaffold_2934_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10060..11340)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81536.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
transcriptional regulator
L3_068_000M1_scaffold_2934_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11526..12638)
DNA (1113bp) protein (371aa)
Methyltransferase FkbM family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYR7_9FIRM
Methyltransferase FkbM family {ECO:0000313|EMBL:CDE81535.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
methyltransferase, FkbM family
L3_068_000M1_scaffold_2934_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12604..13005)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81534.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
conserved hypothetical protein
Displaying 11 items

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