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L3_068_000M1_scaffold_3522

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3522_1
unknown

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comp(1..369)
DNA (369bp) protein (123aa)

This feature has no annotations

L3_068_000M1_scaffold_3522_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1217..1891
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1B7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE81796.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
transcriptional regulator
L3_068_000M1_scaffold_3522_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1906..3456
DNA (1551bp) protein (517aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZK2_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE81795.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
histidine kinase
L3_068_000M1_scaffold_3522_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3485..3970
DNA (486bp) protein (162aa)
HD domain n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZF3_9FIRM
HD domain {ECO:0000313|EMBL:CDE81794.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
HD domain.
L3_068_000M1_scaffold_3522_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4047..4814
DNA (768bp) protein (256aa)
Fic family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1B2_9FIRM
Fic family protein {ECO:0000313|EMBL:CDE81791.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_3522_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5179..5694
DNA (516bp) protein (172aa)
VanZ family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1G7_9FIRM
VanZ family protein {ECO:0000313|EMBL:CDE81788.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
vanz family protein
L3_068_000M1_scaffold_3522_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6215..7144
DNA (930bp) protein (310aa)
Nucleotidyltransferase family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1A9_9FIRM
Nucleotidyltransferase family protein {ECO:0000313|EMBL:CDE81786.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
GalU; UDP-glucose pyrophosphorylase
L3_068_000M1_scaffold_3522_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7144..7899
DNA (756bp) protein (252aa)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZE6_9FIRM
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:CDE81784.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_068_000M1_scaffold_3522_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8175..8957
DNA (783bp) protein (261aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IF31_9FIRM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDE49938.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_3522_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8957..10021
DNA (1065bp) protein (355aa)
CDP-D-glucose-4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase n=1 Tax=Blautia sp. KLE 1732 RepID=U2ETA2_9FIRM
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ERI98077.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_068_000M1_scaffold_3522_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10024..10935
DNA (912bp) protein (304aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IER6_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CDE49936.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
NAD-dependent epimerase/dehydratase
L3_068_000M1_scaffold_3522_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10935..11219
DNA (285bp) protein (95aa)
rfbC_2; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IE85_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDE49935.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Displaying 12 items

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