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L3_068_000M1_scaffold_3852

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_3852_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36..407)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQ74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE77873.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC transporter ATP-binding protein
L3_068_000M1_scaffold_3852_2
unknown

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436..633
DNA (198bp) protein (66aa)

This feature has no annotations

L3_068_000M1_scaffold_3852_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(785..988)
DNA (204bp) protein (68aa)
ATPase and permease component of ABC-type transporter involved in cytochrome bd biosynthesis n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KN95_9FIRM
ATPase and permease component of ABC-type transporter involved in cytochrome bd biosynthesis {ECO:0000313|EMBL:CDE77874.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC transporter ATP-binding protein
L3_068_000M1_scaffold_3852_4
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1162..1329
DNA (168bp) protein (56aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z2F8_9CLOT
sporulation transcriptional regulator SpoIIID
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:AEV67054.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_068_000M1_scaffold_3852_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1345..2265)
DNA (921bp) protein (307aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KNE2_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDE77875.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
AraC-type DNA-binding domain-containing proteins
L3_068_000M1_scaffold_3852_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2344..4320
DNA (1977bp) protein (659aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases family 31 of glycosyl hydrolases n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPX3_9FIRM
Alpha-glucosidases family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CDE77876.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_3852_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4365..5669)
DNA (1305bp) protein (435aa)
beta-fructofuranosidase (EC:3.2.1.26)
Glycosyl hydrolase family 32 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSE7_9FIRM
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:CDE77877.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_3852_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5753..6181
DNA (429bp) protein (143aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQ79_9FIRM
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CDE77878.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
L3_068_000M1_scaffold_3852_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6259..7344
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KN99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE77879.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
HipA-like C-terminal domain.
L3_068_000M1_scaffold_3852_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7337..7630
DNA (294bp) protein (98aa)
Acylphosphatase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KNE6_9FIRM
Acylphosphatase {ECO:0000313|EMBL:CDE77880.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
acylphosphatase
L3_068_000M1_scaffold_3852_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7707..8552)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE77881.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_3852_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8658..9506)
DNA (849bp) protein (283aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQ91_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE77893.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
transcriptional regulator
L3_068_000M1_scaffold_3852_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9664..10278
DNA (615bp) protein (205aa)
Putative HTH DNA binding protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KNB3_9FIRM
Putative HTH DNA binding protein {ECO:0000313|EMBL:CDE77894.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
Displaying 13 items

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