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L3_068_000M1_scaffold_1087

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1087_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158..598)
DNA (441bp) protein (147aa)
GCN5-related N-acetyltransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L469_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDE82758.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
N-acetyltransferase GCN5
L3_068_000M1_scaffold_1087_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(598..2124)
DNA (1527bp) protein (509aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L6D5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE82757.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1087_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2217..2885)
DNA (669bp) protein (223aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L449_9FIRM
L3_068_000M1_scaffold_1087_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2905..3318)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L2B7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE82755.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1087_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3337..4500)
DNA (1164bp) protein (388aa)
Beta-lactamase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L279_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CDE82754.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
putative Beta-lactamase
L3_068_000M1_scaffold_1087_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4514..5854)
DNA (1341bp) protein (447aa)
capsular polysaccharide biosynthesis protein (EC:2.7.10.2)
Exopolysaccharide tyrosine-protein kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L464_9FIRM
Exopolysaccharide tyrosine-protein kinase {ECO:0000313|EMBL:CDE82753.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1087_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5875..7254)
DNA (1380bp) protein (460aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L6D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE82752.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1087_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7427..7723)
DNA (297bp) protein (99aa)
Arylsulfatase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L445_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CDE82751.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1087_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7742..9616)
DNA (1875bp) protein (625aa)
Preprotein translocase YidC subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L2B3_9FIRM
Preprotein translocase YidC subunit {ECO:0000313|EMBL:CDE82750.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
preprotein translocase subunit YidC
L3_068_000M1_scaffold_1087_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9676..11847)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L276_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE82749.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1087_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12068..13264
DNA (1197bp) protein (399aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L252_9FIRM
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:CDE82720.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
GDSL-like Lipase/Acylhydrolase.
L3_068_000M1_scaffold_1087_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13490..14317)
DNA (828bp) protein (276aa)
ABC-type sugar transport system permease component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L230_9FIRM
ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDE82719.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
sugar ABC transporter permease
L3_068_000M1_scaffold_1087_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14314..15156)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L406_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDE82718.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
binding-protein-dependent transport systems inner membrane component
L3_068_000M1_scaffold_1087_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15190..16572)
DNA (1383bp) protein (461aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L684_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE82717.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
extracellular solute-binding protein
L3_068_000M1_scaffold_1087_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16707..17984)
DNA (1278bp) protein (426aa)
Putative permease n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3Z5_9FIRM
Putative permease {ECO:0000313|EMBL:CDE82716.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Predicted permease
L3_068_000M1_scaffold_1087_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18202..19803)
DNA (1602bp) protein (534aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L248_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CDE82715.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1087_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19818..20492)
DNA (675bp) protein (225aa)
CO dehydrogenase/acetyl-CoA synthase alpha subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L225_9FIRM
CO dehydrogenase/acetyl-CoA synthase alpha subunit {ECO:0000313|EMBL:CDE82714.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
CO dehydrogenase/acetyl-CoA synthase alpha subunit
L3_068_000M1_scaffold_1087_18
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20512..21339)
DNA (828bp) protein (276aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L401_9FIRM
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:CDE82713.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_068_000M1_scaffold_1087_19
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21347..22366)
DNA (1020bp) protein (340aa)
4Fe-4S ferredoxin iron-sulfur binding protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L678_9FIRM
4Fe-4S ferredoxin iron-sulfur binding protein {ECO:0000313|EMBL:CDE82712.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
4Fe-4S ferredoxin iron-sulfur binding protein
L3_068_000M1_scaffold_1087_20
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22366..23343)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE82711.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1087_21
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23328..23774)
DNA (447bp) protein (149aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L243_9FIRM
Methyl-viologen-reducing hydrogenase delta subunit {ECO:0000313|EMBL:CDE82710.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
methyl-viologen-reducing hydrogenase delta subunit
L3_068_000M1_scaffold_1087_22
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23765..25777)
DNA (2013bp) protein (671aa)
FAD dependent oxidoreductase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L221_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDE82709.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
FAD dependent oxidoreductase
L3_068_000M1_scaffold_1087_23
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25793..26170)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE82708.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1087_24
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26183..26962)
DNA (780bp) protein (260aa)
Heterodisulfide reductase, subunit B (EC:1.8.98.1)
CoB-CoM heterodisulfide reductase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L671_9FIRM
CoB-CoM heterodisulfide reductase {ECO:0000313|EMBL:CDE82707.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1087_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26983..28359)
DNA (1377bp) protein (459aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3Y2_9FIRM
L3_068_000M1_scaffold_1087_26
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28469..29410)
DNA (942bp) protein (314aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L239_9FIRM
L3_068_000M1_scaffold_1087_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29943..31661
DNA (1719bp) protein (573aa)
Superfamily II DNA and RNA helicases n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L216_9FIRM
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CDE82704.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Superfamily II DNA and RNA helicases
Displaying 27 items

View Taxonomy