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L3_068_000M1_scaffold_1188

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1188_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95..811)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79730.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1188_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1274..1804)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79728.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Flavodoxin domain containing protein
L3_068_000M1_scaffold_1188_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1834..2304)
DNA (471bp) protein (157aa)
Transcriptional regulator MarR family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXT2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE79727.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
marR; MarR family transcriptional regulator
L3_068_000M1_scaffold_1188_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2609..3790)
DNA (1182bp) protein (394aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVB3_9FIRM
Glycoside Hydrolase Family 130 protein
L3_068_000M1_scaffold_1188_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3974..5428)
DNA (1455bp) protein (485aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTQ6_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE79725.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC-type sugar transport system, periplasmic component
L3_068_000M1_scaffold_1188_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5560..7026)
DNA (1467bp) protein (489aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTQ6_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE79725.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC-type sugar transport system, periplasmic component
L3_068_000M1_scaffold_1188_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7326..9293)
DNA (1968bp) protein (656aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTJ8_9FIRM
L3_068_000M1_scaffold_1188_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9341..10003)
DNA (663bp) protein (221aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
conserved hypothetical protein (EC:2.3.1.-)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVF0_9FIRM
L3_068_000M1_scaffold_1188_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10015..10683)
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cmk; Cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXR2_9FIRM
L3_068_000M1_scaffold_1188_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10698..11336)
DNA (639bp) protein (213aa)
Thymidylate synthase flavin-dependent n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVA6_9FIRM
Thymidylate synthase flavin-dependent {ECO:0000313|EMBL:CDE79721.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
thymidylate synthase, flavin-dependent
L3_068_000M1_scaffold_1188_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11337..11846)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79720.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_1188_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11965..12405
DNA (441bp) protein (147aa)
Stage V sporulation protein AC n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTJ3_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CDE79719.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Stage V sporulation protein AC
L3_068_000M1_scaffold_1188_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12407..13156)
DNA (750bp) protein (250aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVE3_9FIRM
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CDE79718.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13532..15235
DNA (1704bp) protein (568aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVC5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE79703.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Fe-S cluster domain-containing protein
L3_068_000M1_scaffold_1188_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15334..15528
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79702.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15552..15860)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KV80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79701.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15889..16635)
DNA (747bp) protein (249aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTM5_9FIRM
L3_068_000M1_scaffold_1188_18
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16652..18097)
DNA (1446bp) protein (482aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVC0_9FIRM
L3_068_000M1_scaffold_1188_19
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18177..19598)
DNA (1422bp) protein (474aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KV73_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
mgtE2; Magnesium transporter
L3_068_000M1_scaffold_1188_20
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19847..20068)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79694.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_21
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20259..21542)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79692.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
spoIIP; Stage II sporulation protein P
L3_068_000M1_scaffold_1188_22
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21922..22737)
DNA (816bp) protein (272aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTL5_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE79690.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Transcriptional regulator, AraC family
L3_068_000M1_scaffold_1188_23
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22926..23903
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79688.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_24
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24312..25382)
DNA (1071bp) protein (357aa)
Glycoside Hydrolase Family 5 protein (EC:3.2.1.-)
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KV58_9FIRM
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDE79686.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1188_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25339..26757)
DNA (1419bp) protein (473aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTF7_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE79684.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC-type sugar transport system, periplasmic component
L3_068_000M1_scaffold_1188_26
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26911..27675
DNA (765bp) protein (255aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXL9_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE79682.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Transcriptional regulator, AraC family
L3_068_000M1_scaffold_1188_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27760..28554
DNA (795bp) protein (265aa)
Beta-glucanase/Beta-glucan synthetase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTF3_9FIRM
Beta-glucanase/Beta-glucan synthetase {ECO:0000313|EMBL:CDE79679.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Beta-glucanase/Beta-glucan synthetase
L3_068_000M1_scaffold_1188_28
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28947..30044
DNA (1098bp) protein (366aa)
Glycoside hydrolase family 16 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXL2_9FIRM
Glycoside hydrolase family 16 {ECO:0000313|EMBL:CDE79677.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
glycoside hydrolase family protein
Displaying 28 items

View Taxonomy