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L3_068_000M1_scaffold_1352

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1352_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..2049)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78213.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1352_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2326..3036)
DNA (711bp) protein (237aa)
Putative Xre family DNA-binding protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPC4_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CDE78215.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_1352_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3224..4966
DNA (1743bp) protein (581aa)
Plasmid recombination protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQW0_9FIRM
Plasmid recombination protein {ECO:0000313|EMBL:CDE78216.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
plasmid recombination protein
L3_068_000M1_scaffold_1352_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5080..5367
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78217.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_1352_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5367..5990
DNA (624bp) protein (208aa)
DNA primase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR27_9FIRM
DNA primase {ECO:0000313|EMBL:CDE78218.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
DNA primase
L3_068_000M1_scaffold_1352_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5959..7251
DNA (1293bp) protein (431aa)
Phage/plasmid primase P4 family C-terminal domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KP91_9FIRM
Phage/plasmid primase P4 family C-terminal domain protein {ECO:0000313|EMBL:CDE78219.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1352_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7525..8706
DNA (1182bp) protein (394aa)
Integrase family protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHH7_RUMA7
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADU21222.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_068_000M1_scaffold_1352_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9658..10806
DNA (1149bp) protein (383aa)
Plectin n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR35_9FIRM
Plectin {ECO:0000313|EMBL:CDE78223.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
plectin
L3_068_000M1_scaffold_1352_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10890..12341)
DNA (1452bp) protein (484aa)
asd; Alpha-N-arabinofuranosidase (Glycoside Hydrolase Family 51 protein ) (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KP96_9FIRM
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:CDE78224.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1352_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12500..13288
DNA (789bp) protein (263aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPD5_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDE78225.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
AraC-type DNA-binding domain-containing proteins
L3_068_000M1_scaffold_1352_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13349..14215
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78226.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1352_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14264..14851
DNA (588bp) protein (196aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTG8_9FIRM
Sortase and related acyltransferases {ECO:0000313|EMBL:CDE78227.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1352_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14946..15755
DNA (810bp) protein (270aa)
Cof-like hydrolase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR62_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CDE78228.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
cof family hydrolase
L3_068_000M1_scaffold_1352_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15953..17473)
DNA (1521bp) protein (507aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPB9_9FIRM
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
L3_068_000M1_scaffold_1352_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17561..18337)
DNA (777bp) protein (259aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPG5_9FIRM
L3_068_000M1_scaffold_1352_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18506..18943)
DNA (438bp) protein (146aa)
Pentapeptide repeat protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQZ8_9FIRM
Pentapeptide repeat protein {ECO:0000313|EMBL:CDE78231.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1352_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19084..20307)
DNA (1224bp) protein (408aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTH7_9FIRM
L3_068_000M1_scaffold_1352_18
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20519..20878)
DNA (360bp) protein (120aa)
Stage V sporulation protein AE n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPC9_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:CDE78234.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
stage V sporulation protein AE
L3_068_000M1_scaffold_1352_19
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20884..21900)
DNA (1017bp) protein (339aa)
Stage V sporulation protein AD n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR08_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDE78236.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
stage V sporulation protein AD
L3_068_000M1_scaffold_1352_20
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22033..23526
DNA (1494bp) protein (498aa)
Amino acid carrier protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KR81_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDE78238.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
amino acid carrier protein
L3_068_000M1_scaffold_1352_21
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23569..24279
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78240.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1352_22
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24595..26232)
DNA (1638bp) protein (546aa)
Endoglucanase A n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L4G3_9FIRM
Endoglucanase A {ECO:0000313|EMBL:CDE82087.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1352_23
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26283..26648)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE82090.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
Displaying 23 items

View Taxonomy