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L3_068_000M1_scaffold_1636

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1636_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1096)
DNA (1095bp) protein (365aa)
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6S341_9CLOT
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit {ECO:0000313|EMBL:CDC41032.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_068_000M1_scaffold_1636_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1159..3135)
DNA (1977bp) protein (659aa)
DNA topoisomerase (EC:5.99.1.3)
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTP6_9FIRM
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:CDE79749.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1636_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3157..3504)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79748.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1636_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3525..4475)
DNA (951bp) protein (317aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
putative deaminase (EC:3.5.4.-)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXV2_9FIRM
L3_068_000M1_scaffold_1636_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4472..5548)
DNA (1077bp) protein (359aa)
Abortive infection protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVF5_9FIRM
Abortive infection protein {ECO:0000313|EMBL:CDE79746.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
abortive infection protein
L3_068_000M1_scaffold_1636_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5975..7045
DNA (1071bp) protein (357aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTV1_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
heat shock gene repressor HrcA
L3_068_000M1_scaffold_1636_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7050..7646
DNA (597bp) protein (199aa)
Protein GrpE n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTP1_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
grpE; heat shock protein GrpE
L3_068_000M1_scaffold_1636_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7711..9561
DNA (1851bp) protein (617aa)
Chaperone protein DnaK n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVK3_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
chaperone protein DnaK
L3_068_000M1_scaffold_1636_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9721..10890
DNA (1170bp) protein (390aa)
Chaperone protein DnaJ n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXU8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
dnaJ; Chaperone protein DnaJ
L3_068_000M1_scaffold_1636_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11092..11538)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79741.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1636_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11564..12988)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Two-component system sensor histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTU8_9FIRM
L3_068_000M1_scaffold_1636_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13043..13765)
DNA (723bp) protein (241aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTN6_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDE79739.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Two-component system transcriptional regulator
L3_068_000M1_scaffold_1636_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13794..14141)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79738.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1636_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14138..16090)
DNA (1953bp) protein (651aa)
Pullulanase type I n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXU5_9FIRM
Pullulanase type I {ECO:0000313|EMBL:CDE79737.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
pullulanase
L3_068_000M1_scaffold_1636_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16541..17131
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79736.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1636_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17205..17669
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79735.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_1636_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17771..18580
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79734.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_1636_18
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18620..21574)
DNA (2955bp) protein (985aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVJ4_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDE79733.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
putative CoA-substrate-specific enzyme activase
L3_068_000M1_scaffold_1636_19
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21624..22124)
DNA (501bp) protein (167aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXU1_9FIRM
L3_068_000M1_scaffold_1636_20
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22135..22779)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KVD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79731.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
Displaying 20 items

View Taxonomy