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L3_068_000M1_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_473_1
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1161
DNA (1161bp) protein (387aa)
Glycoside hydrolase family 9 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3U5_9FIRM
Glycoside hydrolase family 9 {ECO:0000313|EMBL:CDE81862.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
glycoside hydrolase family protein
L3_068_000M1_scaffold_473_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1293..1496)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81863.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1526..2893)
DNA (1368bp) protein (456aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZL4_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_4
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3078..3902)
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZQ4_9FIRM
hypothetical protein
L3_068_000M1_scaffold_473_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3904..4635)
DNA (732bp) protein (244aa)
Predicted O-methyltransferase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1H8_9FIRM
Predicted O-methyltransferase {ECO:0000313|EMBL:CDE81866.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Predicted O-methyltransferase
L3_068_000M1_scaffold_473_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4731..5618)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81867.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Transcriptional regulator
L3_068_000M1_scaffold_473_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6222..6449
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81868.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_8
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6928..7239)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81020.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_9
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7253..7480)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81021.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Putative HTH-type transcriptional regulator
L3_068_000M1_scaffold_473_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7607..7936
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81022.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_11
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7939..8211
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81023.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_12
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8356..8673
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KX75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81024.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8760..9536
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81025.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_473_14
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9533..10768
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KYZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81026.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_15
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10772..11014
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KX81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81029.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_068_000M1_scaffold_473_16
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11113..11265
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81032.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11367..12350
DNA (984bp) protein (328aa)
Replication initiation factor family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KX87_9FIRM
Replication initiation factor family protein {ECO:0000313|EMBL:CDE81034.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
replication initiation factor
L3_068_000M1_scaffold_473_18
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12352..13248
DNA (897bp) protein (299aa)
Phage integrase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ06_9FIRM
Phage integrase {ECO:0000313|EMBL:CDE81036.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
integrase family protein
L3_068_000M1_scaffold_473_19
unknown

Not on your lists

13273..13464
DNA (192bp) protein (64aa)

This feature has no annotations

L3_068_000M1_scaffold_473_20
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13709..14107)
DNA (399bp) protein (133aa)
Predicted transcriptional regulators n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H0D3_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDE32751.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
XRE family transcriptional regulator
L3_068_000M1_scaffold_473_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14454..15251
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WX73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF40926.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_068_000M1_scaffold_473_22
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15619..16509
DNA (891bp) protein (297aa)
Phage integrase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ06_9FIRM
Phage integrase {ECO:0000313|EMBL:CDE81036.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
site-specific recombinase XerD
L3_068_000M1_scaffold_473_23
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16751..18364)
DNA (1614bp) protein (538aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ78_9FIRM
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDE81038.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
ABC-type oligopeptide transport system, periplasmic component
L3_068_000M1_scaffold_473_24
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18384..18809)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Putative Holliday junction resolvase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KX94_9FIRM
conserved hypothetical protein TIGR00250
L3_068_000M1_scaffold_473_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18829..19482)
DNA (654bp) protein (218aa)
Phosphoglycerate mutase family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXC0_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDE81040.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
phosphoglycerate mutase
L3_068_000M1_scaffold_473_26
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19488..20357)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81041.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
adenylyltransferase
L3_068_000M1_scaffold_473_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20351..21268)
DNA (918bp) protein (306aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Dihydroorotate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1D5_9FIRM
dihydroorotate dehydrogenase family protein
L3_068_000M1_scaffold_473_28
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21261..22040)
DNA (780bp) protein (260aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase B (NAD(+)) electron transfer subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ82_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)) electron transfer subunit {ECO:0000313|EMBL:CDE81043.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_29
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22058..22894)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81044.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_068_000M1_scaffold_473_30
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22986..26177)
DNA (3192bp) protein (1064aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXC5_9FIRM
Displaying items 1-30 of 53 in total

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