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L3_068_000M1_scaffold_1354

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1354_1
unknown

Not on your lists

126..254
DNA (129bp) protein (43aa)

This feature has no annotations

L3_068_000M1_scaffold_1354_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

251..835
DNA (585bp) protein (195aa)
Heat shock protein DnaJ domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMQ5_CLOBU
Molecular chaperone DnaJ {ECO:0000313|EMBL:KHD14106.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
heat shock protein DnaJ domain-containing protein
L3_068_000M1_scaffold_1354_3
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1000..1221
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KAJ50645.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
L3_068_000M1_scaffold_1354_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1993..4734)
DNA (2742bp) protein (914aa)
Putative serine/threonine protein kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9R2_9FIRM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDA55781.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NB-ARC domain./Protein kinase domain.
L3_068_000M1_scaffold_1354_5
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5202..6590
DNA (1389bp) protein (463aa)
Primase putative n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LNI7_9FIRM
Primase putative {ECO:0000313|EMBL:CCY74567.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L3_068_000M1_scaffold_1354_6
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6587..7087
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L656_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY74563.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_1354_7
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7087..8184
DNA (1098bp) protein (366aa)
Possible mobilisation protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LNB9_9FIRM
Possible mobilisation protein {ECO:0000313|EMBL:CCY74561.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
mobilisation protein
L3_068_000M1_scaffold_1354_8
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8181..8288
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L5Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY74560.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_1354_9
unknown

Not on your lists

8329..8499
DNA (171bp) protein (57aa)

This feature has no annotations

L3_068_000M1_scaffold_1354_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8553..9395
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIA6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31872.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
site-specific recombinase, DNA invertase Pin
L3_068_000M1_scaffold_1354_11
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9415..10236
DNA (822bp) protein (274aa)
Resolvase domain-containing protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H0Q0_9FIRM
Resolvase domain-containing protein {ECO:0000313|EMBL:CCY18391.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein
L3_068_000M1_scaffold_1354_12
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10377..11390)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6F4U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97022.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
protein-tyrosine-phosphatase
L3_068_000M1_scaffold_1354_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11889..13421)
DNA (1533bp) protein (511aa)
Kinase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0G6_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EDM98316.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
serine/threonine protein kinase
L3_068_000M1_scaffold_1354_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13423..15060)
DNA (1638bp) protein (546aa)
serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2APL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ28040.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_068_000M1_scaffold_1354_15
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15063..15500
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42738.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L3_068_000M1_scaffold_1354_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15584..16021
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2F2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38721.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_068_000M1_scaffold_1354_17
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16133..17365
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381E3BF
Uncharacterized protein {ECO:0000313|EMBL:EMZ24483.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_068_000M1_scaffold_1354_18
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17445..17795)
DNA (351bp) protein (117aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFP9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG29678.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
phage regulatory protein
L3_068_000M1_scaffold_1354_19
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18103..20049
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI000382C1C7
Uncharacterized protein {ECO:0000313|EMBL:EOS49872.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_068_000M1_scaffold_1354_20
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20061..20756
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00037BC8E7
Uncharacterized protein {ECO:0000313|EMBL:EOS49873.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_068_000M1_scaffold_1354_21
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20811..24593
DNA (3783bp) protein (1261aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DK21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88868.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_068_000M1_scaffold_1354_22
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24680..26653
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Veillonella sp. ACP1 RepID=J4RNH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJO49102.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
L3_068_000M1_scaffold_1354_23
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26661..26834)
DNA (174bp) protein (58aa)
DNA binding domain-containing protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LH63_9FIRM
DNA binding domain-containing protein {ECO:0000313|EMBL:CCY72486.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein predicted by Glimmer/Critica
L3_068_000M1_scaffold_1354_24
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27173..27457
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L5H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY72589.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L3_068_000M1_scaffold_1354_25
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27470..28576
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C371CE
LIM zinc-binding protein {ECO:0000313|EMBL:EWM52368.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_068_000M1_scaffold_1354_26
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28579..29562
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LHW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY72592.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L3_068_000M1_scaffold_1354_27
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29685..30284
DNA (600bp) protein (200aa)
Resolvase/recombinase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L0I5_9FIRM
Resolvase/recombinase {ECO:0000313|EMBL:CCY72593.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
site-specific recombinase, DNA invertase Pin
L3_068_000M1_scaffold_1354_28
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30357..30599)
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=2 Tax=Eubacterium RepID=B0MLW6_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:CDC45481.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Phd_YefM.
L3_068_000M1_scaffold_1354_29
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30863..31078)
DNA (216bp) protein (72aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZQ73_9CLOT
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EMZ19162.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_068_000M1_scaffold_1354_30
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31307..32332
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H067_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY18382.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Displaying items 1-30 of 33 in total

View Taxonomy