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L3_068_000M1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_56_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

286..1692
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RPI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49560.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_000M1_scaffold_56_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1689..2330
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S2N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49561.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_068_000M1_scaffold_56_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2466..5597
DNA (3132bp) protein (1044aa)
RecF/RecN/SMC N terminal domain-containing protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SSJ5_9CLOT
RecF/RecN/SMC N terminal domain-containing protein {ECO:0000313|EMBL:CDC49562.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
RecF/RecN/SMC N terminal domain-containing protein
L3_068_000M1_scaffold_56_4
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5551..6816
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B67F0C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36132.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_068_000M1_scaffold_56_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6923..8713)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61084.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_068_000M1_scaffold_56_6
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8892..10022)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FFE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE13381.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Putative bacteriophage repressor protein CI
L3_068_000M1_scaffold_56_7
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10557..10865
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GXM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY20504.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
L3_068_000M1_scaffold_56_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

10868..11800
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M2T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93968.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_068_000M1_scaffold_56_9
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11812..12405
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H704_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY20506.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
phage DNA replication protein (predicted replicative helicase loader)
L3_068_000M1_scaffold_56_10
unknown

Not on your lists

12565..12954
DNA (390bp) protein (130aa)

This feature has no annotations

L3_068_000M1_scaffold_56_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13245..14627
DNA (1383bp) protein (461aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT
site-specific recombinase XerD
Tax=BJP_IG2103_Clostridiales_50_15
L3_068_000M1_scaffold_56_12
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14821..16149
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AF54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26651.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
abortive infection protein
L3_068_000M1_scaffold_56_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16146..16799
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XAU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03447.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_068_000M1_scaffold_56_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16857..19232)
DNA (2376bp) protein (792aa)
VE01 n=1 Tax=Enterococcus faecalis RepID=C4P4H8_ENTFL
VE01 {ECO:0000313|EMBL:ACQ89861.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
hypothetical protein
L3_068_000M1_scaffold_56_15
unknown

Not on your lists

19436..19537
DNA (102bp) protein (34aa)

This feature has no annotations

L3_068_000M1_scaffold_56_16
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19626..20072)
DNA (447bp) protein (149aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CF09_9FIRM
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CDA74230.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L3_068_000M1_scaffold_56_17
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20238..21206)
DNA (969bp) protein (323aa)
HipA-like C-terminal domain./HipA-like N-terminal domain n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q3S8_9FIRM
HipA-like C-terminal domain./HipA-like N-terminal domain {ECO:0000313|EMBL:CCZ20979.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
HipA-like C-terminal domain./HipA-like N-terminal domain.
L3_068_000M1_scaffold_56_18
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21203..21532)
DNA (330bp) protein (110aa)
HipA domain protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GX84_9FIRM
HipA domain protein {ECO:0000313|EMBL:CCY17176.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
HipA N-terminal domain
L3_068_000M1_scaffold_56_19
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21532..21735)
DNA (204bp) protein (68aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GIB2_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CCY17175.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Helix-turn-helix.
L3_068_000M1_scaffold_56_20
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21952..22425
DNA (474bp) protein (158aa)
Putative acetyltransferase n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GN86_9FIRM
Putative acetyltransferase {ECO:0000313|EMBL:CCY17174.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Acetyltransferase, GNAT family
L3_068_000M1_scaffold_56_21
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22467..23009
DNA (543bp) protein (181aa)
Acetyltransferase GNAT family n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GIX4_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY17173.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hydrolase
L3_068_000M1_scaffold_56_22
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23150..23437
DNA (288bp) protein (96aa)
Prophage protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GWP8_9FIRM
Prophage protein {ECO:0000313|EMBL:CCY17172.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein
L3_068_000M1_scaffold_56_23
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23496..23891
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L3T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73773.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_24
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23888..24229
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L8P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73774.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_25
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24243..24377
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L3N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73775.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_26
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24400..24762
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LKZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73776.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_27
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24774..26261
DNA (1488bp) protein (496aa)
KID repeat-containing protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LL83_9FIRM
KID repeat-containing protein {ECO:0000313|EMBL:CCY73777.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_28
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26261..27580
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L3T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73778.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_29
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27627..27800)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L8P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY73779.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
L3_068_000M1_scaffold_56_30
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27841..28701)
DNA (861bp) protein (287aa)
Putative patatin-like phospholipase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L3P3_9FIRM
Putative patatin-like phospholipase {ECO:0000313|EMBL:CCY73780.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
patatin-like phospholipase
Displaying items 1-30 of 137 in total

View Taxonomy