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L3_068_000M1_scaffold_1237

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1237_1
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1552)
DNA (1551bp) protein (517aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LG02_9FIRM
L3_068_000M1_scaffold_1237_2
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1897..2721)
DNA (825bp) protein (275aa)
ABC transporter, ATP-binding protein n=3 Tax=Coprococcus RepID=A8SSY6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB81032.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ABC transporter
L3_068_000M1_scaffold_1237_3
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2705..3415)
DNA (711bp) protein (237aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K424_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDP26581.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_068_000M1_scaffold_1237_4
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3476..4363)
DNA (888bp) protein (296aa)
Glutamine ABC transporter periplasmic family protein n=2 Tax=Coprococcus RepID=A8SSY4_9FIRM
Glutamine ABC transporter periplasmic family protein {ECO:0000313|EMBL:EDP26580.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_068_000M1_scaffold_1237_5
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4565..5287
DNA (723bp) protein (241aa)
TIGR00266 family protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SSY3_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:EDP26579.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
conserved hypothetical protein TIGR00266
L3_068_000M1_scaffold_1237_6
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5599..6882
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SSY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP26578.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
aspartate aminotransferase
L3_068_000M1_scaffold_1237_7
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7209..7661
DNA (453bp) protein (151aa)
6-pyruvoyl tetrahydropterin synthase-related domain (EC:4.2.3.12)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LG07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81036.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_8
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7731..8504
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6M4L8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB81037.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_9
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8552..9157
DNA (606bp) protein (202aa)
Exosortase family protein n=2 Tax=Coprococcus RepID=D5HGK3_9FIRM
exosortase family protein
Exosortase family protein {ECO:0000313|EMBL:CDB81038.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_10
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9129..10535
DNA (1407bp) protein (469aa)
Putative glycosyltransferase TIGR03111 n=2 Tax=Coprococcus RepID=D5HGK2_9FIRM
Putative glycosyltransferase TIGR03111 {ECO:0000313|EMBL:CDB81039.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
putative glycosyltransferase TIGR03111
L3_068_000M1_scaffold_1237_11
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10532..11641
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L5Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81040.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_1237_12
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11706..12155
DNA (450bp) protein (150aa)
6-pyruvoyl tetrahydropterin synthase-related domain (EC:4.2.3.12)
6-pyruvoyl tetrahydropterin synthase-related domain n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LG10_9FIRM
6-pyruvoyl tetrahydropterin synthase-related domain {ECO:0000313|EMBL:CDB81041.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_13
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12152..14623
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81042.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
6-pyruvoyl tetrahydrobiopterin synthase
L3_068_000M1_scaffold_1237_14
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14657..16177
DNA (1521bp) protein (507aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L0L2_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDB81043.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
methyl-accepting chemotaxis sensory transducer
L3_068_000M1_scaffold_1237_15
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16193..17464
DNA (1272bp) protein (424aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Clostridium sp. CAG:127 RepID=R5NNI1_9CLOT
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDB81044.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ABC-type sugar transport system, periplasmic component
L3_068_000M1_scaffold_1237_16
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17562..18203
DNA (642bp) protein (214aa)
Putative transcription regulator n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WD97_9FIRM
Putative transcription regulator {ECO:0000313|EMBL:CCZ93766.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
regulatory protein TetR
L3_068_000M1_scaffold_1237_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18449..19150
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LG14_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB81046.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ABC transporter ATP-binding protein
L3_068_000M1_scaffold_1237_18
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19152..21875
DNA (2724bp) protein (908aa)
Efflux ABC transporter permease protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5W104_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ93764.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_068_000M1_scaffold_1237_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..22326)
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2T4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC67758.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_068_000M1_scaffold_1237_20
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22470..23306
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L0L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81048.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_21
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23317..24591
DNA (1275bp) protein (425aa)
NPCBM/NEW2 domain n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LC20_9FIRM
NPCBM/NEW2 domain {ECO:0000313|EMBL:CDB81049.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_22
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24680..25606
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L5R1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81050.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_1237_23
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25705..26259
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGJ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB81051.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_1237_24
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26435..27631)
DNA (1197bp) protein (399aa)
Transposase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PHV1_9CLOT
Transposase {ECO:0000313|EMBL:CCZ09486.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Site-specific recombinase XerD
L3_068_000M1_scaffold_1237_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27708..27914)
DNA (207bp) protein (69aa)
DNA binding domain, excisionase family n=12 Tax=Firmicutes RepID=B1C4S8_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:ELB40602.1}; TaxID=1138915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0024.;"
Excisionase from transposon Tn916.
L3_068_000M1_scaffold_1237_26
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27907..28908)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WV40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70743.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
Displaying 26 items

View Taxonomy