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L3_068_000M1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_79_1
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(410..1771)
DNA (1362bp) protein (454aa)
DNA repair protein radA n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L7K7_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
DNA repair protein RadA
L3_068_000M1_scaffold_79_2
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1795..2211)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L171_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79495.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_79_3
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2448..4931)
DNA (2484bp) protein (828aa)
ATPases with chaperone activity ATP-binding subunit n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBN2_9FIRM
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CDB79496.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ATPases with chaperone activity, ATP-binding subunit
L3_068_000M1_scaffold_79_4
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5061..6332)
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LZY6_9FIRM
L3_068_000M1_scaffold_79_5
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6344..6970)
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KW69_9FIRM
L3_068_000M1_scaffold_79_6
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6964..7989)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L7N1_9FIRM
L3_068_000M1_scaffold_79_7
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8215..10524
DNA (2310bp) protein (770aa)
Transcriptional regulators n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L1A0_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CDB79500.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Transcriptional regulators
L3_068_000M1_scaffold_79_8
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10616..12721)
DNA (2106bp) protein (702aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBP7_9FIRM
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:CDB79501.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Leucyl aminopeptidase (aminopeptidase T)
L3_068_000M1_scaffold_79_9
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12734..13048)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6M000_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB79502.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_79_10
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13035..13499)
DNA (465bp) protein (155aa)
VanZ-like protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KW79_9FIRM
VanZ-like protein {ECO:0000313|EMBL:CDB79503.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
VanZ family protein
L3_068_000M1_scaffold_79_11
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13513..14733)
DNA (1221bp) protein (407aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic {ECO:0000313|EMBL:CBK84087.1}; EC=6.3.2.5 {ECO:0000313|EMBL:CBK84087.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGQ4_9FIRM
L3_068_000M1_scaffold_79_12
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14769..15614)
DNA (846bp) protein (282aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Pantothenate synthetase n=2 Tax=Coprococcus RepID=D5HGQ5_9FIRM
L3_068_000M1_scaffold_79_13
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15629..16426)
DNA (798bp) protein (266aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Coprococcus RepID=D5HGQ6_9FIRM
L3_068_000M1_scaffold_79_14
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16383..17348)
DNA (966bp) protein (322aa)
Uncharacterized conserved protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M004_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB79507.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_79_15
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17476..17967)
DNA (492bp) protein (164aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Coprococcus RepID=D5HGQ9_9FIRM
L3_068_000M1_scaffold_79_16
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18040..22350)
DNA (4311bp) protein (1437aa)
Predicted periplasmic ligand-binding sensor domain n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGR0_9FIRM
Predicted periplasmic ligand-binding sensor domain
Predicted periplasmic ligand-binding sensor domain {ECO:0000313|EMBL:CBK84093.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_79_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22377..23756)
DNA (1380bp) protein (460aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L1B3_9FIRM
L3_068_000M1_scaffold_79_18
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23772..25442)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79511.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_79_19
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25429..26154)
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M009_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB79512.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
multidrug ABC transporter ATPase
L3_068_000M1_scaffold_79_20
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26223..30065)
DNA (3843bp) protein (1281aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGR3_9FIRM
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
L3_068_000M1_scaffold_79_21
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30070..33774)
DNA (3705bp) protein (1235aa)
ATP-dependent nuclease, subunit B n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGR4_9FIRM
ATP-dependent nuclease, subunit B {ECO:0000313|EMBL:CBK84097.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
ATP-dependent nuclease, subunit B
L3_068_000M1_scaffold_79_22
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33894..34376
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VQC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92993.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_068_000M1_scaffold_79_23
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34480..35208)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGR5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK84098.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_79_24
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35243..37207)
DNA (1965bp) protein (655aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STZ5_9FIRM
L3_068_000M1_scaffold_79_25
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37671..39779)
DNA (2109bp) protein (703aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase {ECO:0000313|EMBL:CBK84099.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CBK84099.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Uncharacterized protein related to glutamine synthetase n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HGR6_9FIRM
L3_068_000M1_scaffold_79_26
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39945..40619)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92989.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_068_000M1_scaffold_79_27
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40610..41818)
DNA (1209bp) protein (403aa)
Abortive infection protein putative n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VQC2_9FIRM
Abortive infection protein putative {ECO:0000313|EMBL:CCZ92988.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_068_000M1_scaffold_79_28
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41974..42693)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L7W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79594.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Calcineurin-like phosphoesterase.
L3_068_000M1_scaffold_79_29
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42730..43851)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WB45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92986.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L3_068_000M1_scaffold_79_30
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44118..44645)
DNA (528bp) protein (176aa)
Competence/damage-inducible domain protein CinA n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L7W2_9FIRM
Competence/damage-inducible domain protein CinA {ECO:0000313|EMBL:CDB79589.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Uncharacterized protein (competence-and mitomycin-induced)
Displaying items 1-30 of 129 in total

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