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L3_068_000M1_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_166_1
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..650
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L119_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79450.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_166_2
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

661..1080
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y552_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59371.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_068_000M1_scaffold_166_3
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1664..2872
DNA (1209bp) protein (403aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Coprococcus RepID=D5HHH2_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBK82227.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_4
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3032..3571
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LAB0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB79041.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_166_5
unknown

Not on your lists

3895..4014
DNA (120bp) protein (40aa)

This feature has no annotations

L3_068_000M1_scaffold_166_6
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4123..5421
DNA (1299bp) protein (433aa)
SCP-like protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZZ8_9FIRM
SCP-like protein {ECO:0000313|EMBL:CDB79040.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_166_7
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5478..5927)
DNA (450bp) protein (150aa)
Predicted transcriptional regulators n=2 Tax=Coprococcus RepID=D5HHG9_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CDB79039.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_166_8
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6049..6696)
DNA (648bp) protein (216aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Thiamine-phosphate synthase n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHG8_9FIRM
L3_068_000M1_scaffold_166_9
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6770..8023)
DNA (1254bp) protein (418aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LYL3_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDB79037.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
thiazole biosynthesis protein ThiH
L3_068_000M1_scaffold_166_10
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8038..8808)
DNA (771bp) protein (257aa)
Thiazole-phosphate synthase n=2 Tax=Coprococcus RepID=D5HHG6_9FIRM
thiazole-phosphate synthase
Thiazole-phosphate synthase {ECO:0000313|EMBL:CDB79036.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_166_11
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8808..9008)
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=2 Tax=Coprococcus RepID=D5HHG5_9FIRM
sulfur carrier protein ThiS
Sulfur carrier protein ThiS {ECO:0000313|EMBL:CBK82220.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_12
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9433..10776
DNA (1344bp) protein (448aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
phenylacetate-CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SUK6_9FIRM
L3_068_000M1_scaffold_166_13
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11191..12672
DNA (1482bp) protein (494aa)
SSS sodium solute transporter superfamily n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHG3_9FIRM
SSS sodium solute transporter superfamily
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CBK82218.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_14
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13223..13489
DNA (267bp) protein (89aa)
Outer membrane protein and related peptidoglycan-associated (Lipo)proteins n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHG2_9FIRM
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
Outer membrane protein and related peptidoglycan-associated (Lipo)proteins {ECO:0000313|EMBL:CBK82217.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_15
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13536..14525
DNA (990bp) protein (330aa)
TrkA-C domain./Ion transport protein n=2 Tax=Coprococcus RepID=D5HHG1_9FIRM
TrkA-C domain./Ion transport protein.
TrkA-C domain./Ion transport protein {ECO:0000313|EMBL:CDB79031.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_166_16
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14766..16370
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Coprococcus RepID=A8SUJ7_9FIRM
L3_068_000M1_scaffold_166_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16567..18096
DNA (1530bp) protein (510aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L6E4_9FIRM
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:CDB79029.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_166_18
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18108..18878
DNA (771bp) protein (257aa)
Putative DNA metabolism protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KUX5_9FIRM
Putative DNA metabolism protein {ECO:0000313|EMBL:CDB79028.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_166_19
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19002..19292
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=2 Tax=Coprococcus RepID=D5HHF9_9FIRM
SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_20
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19309..19761
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LA99_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
single-strand binding protein
L3_068_000M1_scaffold_166_21
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19779..20042
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=2 Tax=Coprococcus RepID=D5HHF7_9FIRM
SSU ribosomal protein S18P
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_166_22
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20172..21089
DNA (918bp) protein (306aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L6D9_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDB79024.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ABC-type multidrug transport system, ATPase component
L3_068_000M1_scaffold_166_23
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21082..21852
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6KUX1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB79023.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_166_24
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22000..23331
DNA (1332bp) protein (444aa)
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase, type I {ECO:0000313|EMBL:CBK82209.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CBK82209.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Glutamine synthetase, type I n=2 Tax=Coprococcus RepID=D5HHF4_9FIRM
L3_068_000M1_scaffold_166_25
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23444..23995
DNA (552bp) protein (184aa)
ANTAR domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LA94_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:CDB79021.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
response regulator receiver/ANTAR domain-containing protein
L3_068_000M1_scaffold_166_26
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24021..24821
DNA (801bp) protein (267aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WL12_9FIRM
L3_068_000M1_scaffold_166_27
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24832..26049
DNA (1218bp) protein (406aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZY6_9FIRM
L3_068_000M1_scaffold_166_28
unknown

Not on your lists

26075..26242
DNA (168bp) protein (56aa)

This feature has no annotations

L3_068_000M1_scaffold_166_29
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26266..27765
DNA (1500bp) protein (500aa)
Glycosidases (EC:3.2.1.1)
Glycosidases {ECO:0000313|EMBL:CBK82207.1}; EC=3.2.1.1 {ECO:0000313|EMBL:CBK82207.1};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Glycosidases n=2 Tax=Coprococcus RepID=D5HHF2_9FIRM
L3_068_000M1_scaffold_166_30
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27833..28162
DNA (330bp) protein (110aa)
TrpR-related protein YerC/YecD n=2 Tax=Coprococcus RepID=D5HHF1_9FIRM
TrpR-related protein YerC/YecD
TrpR-related protein YerC/YecD {ECO:0000313|EMBL:CBK82206.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Displaying items 1-30 of 95 in total

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