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L3_068_000M1_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_285_1
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(198..1082)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LAY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB79296.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_285_2
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1206..1421)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6L0K1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB79295.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_285_3
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1718..3469)
DNA (1752bp) protein (584aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L6Z3_9FIRM
Aspartate--tRNA ligase 2 {ECO:0000313|EMBL:CDB79294.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_285_4
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4031..4393)
DNA (363bp) protein (121aa)
Predicted membrane protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDB3_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK82896.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_5
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4483..5451)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
tRNA-dihydrouridine synthase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LZ97_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
L3_068_000M1_scaffold_285_6
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5578..6999)
DNA (1422bp) protein (474aa)
Transporter n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LAY2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Na+-dependent transporters of the SNF family
L3_068_000M1_scaffold_285_7
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7023..7874)
DNA (852bp) protein (284aa)
Predicted metal-dependent phosphoesterases (PHP family) n=2 Tax=Coprococcus RepID=D5HDB5_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CDB79290.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_285_8
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7913..8953)
DNA (1041bp) protein (347aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Signal peptidase I, bacterial type n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDB6_9FIRM
signal peptidase I, bacterial type
L3_068_000M1_scaffold_285_9
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9086..10537)
DNA (1452bp) protein (484aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Coprococcus RepID=D5HDB7_9FIRM
L3_068_000M1_scaffold_285_10
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10689..12824)
DNA (2136bp) protein (712aa)
Arylsulfatase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LZ93_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CDB79287.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_285_11
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13340..13696)
DNA (357bp) protein (119aa)
Copper chaperone n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDB8_9FIRM
Copper chaperone
Copper chaperone {ECO:0000313|EMBL:CBK82901.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_12
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13718..14203)
DNA (486bp) protein (162aa)
Fe2+/Zn2+ uptake regulation proteins n=2 Tax=Coprococcus RepID=D5HDB9_9FIRM
Fe2+/Zn2+ uptake regulation proteins
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDB79285.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_285_13
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14308..16740)
DNA (2433bp) protein (811aa)
Histidine kinase A domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L6Y8_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:CDB79284.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
histidine kinase
L3_068_000M1_scaffold_285_14
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16740..17429)
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDC0_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK82903.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_15
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17643..18836
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDC1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82904.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_16
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18901..19806)
DNA (906bp) protein (302aa)
Mg2+ and Co2+ transporters n=2 Tax=Coprococcus RepID=D5HDC2_9FIRM
Mg2+ and Co2+ transporters
Mg2+ and Co2+ transporters {ECO:0000313|EMBL:CBK82905.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_17
unknown

Not on your lists

comp(19781..19876)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_068_000M1_scaffold_285_18
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19930..21471)
DNA (1542bp) protein (514aa)
Na+/proline symporter n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDC3_9FIRM
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:CBK82906.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_19
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21654..21773)
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDC4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82907.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_20
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21788..22750)
DNA (963bp) protein (321aa)
K+-dependent Na+/Ca+ exchanger related-protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDC5_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger related-protein {ECO:0000313|EMBL:CBK82908.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_21
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22836..23345)
DNA (510bp) protein (170aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M014_9FIRM
L3_068_000M1_scaffold_285_22
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23342..23800)
DNA (459bp) protein (153aa)
HTH domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KW95_9FIRM
HTH domain protein {ECO:0000313|EMBL:CDB79518.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
transcriptional regulator
L3_068_000M1_scaffold_285_23
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23825..24769)
DNA (945bp) protein (315aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L7Q8_9FIRM
Transporter auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:CDB79519.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Predicted permeases
L3_068_000M1_scaffold_285_24
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25891..26160)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6L4M5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82909.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_25
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26330..28678)
DNA (2349bp) protein (783aa)
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Superfamily I DNA and RNA helicases n=2 Tax=Coprococcus RepID=D5HDC7_9FIRM
L3_068_000M1_scaffold_285_26
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28810..29790)
DNA (981bp) protein (327aa)
Putative virion core protein (Lumpy skin disease virus) n=2 Tax=Coprococcus RepID=D5HDC8_9FIRM
Putative virion core protein (lumpy skin disease virus)
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:CBK82911.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_27
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29830..30507)
DNA (678bp) protein (226aa)
Phage shock protein A, PspA n=2 Tax=Coprococcus RepID=D5HDC9_9FIRM
phage shock protein A, PspA
Phage shock protein A, PspA {ECO:0000313|EMBL:CBK82912.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_28
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30745..31704)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LAZ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82913.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_29
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31785..32468)
DNA (684bp) protein (228aa)
Predicted glutamine amidotransferases n=2 Tax=Coprococcus RepID=D5HDD1_9FIRM
Predicted glutamine amidotransferases
Predicted glutamine amidotransferases {ECO:0000313|EMBL:CBK82914.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_285_30
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32474..34864)
DNA (2391bp) protein (797aa)
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) n=2 Tax=Coprococcus RepID=D5HDD2_9FIRM
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) {ECO:0000313|EMBL:CDB80701.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Displaying items 1-30 of 64 in total

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