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L3_068_000M1_scaffold_979

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_979_1
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81..722)
DNA (642bp) protein (214aa)
DNA-binding helix-turn-helix protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXK1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP25395.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Predicted transcriptional regulators
L3_068_000M1_scaffold_979_2
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

943..1206
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7A4Z1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD55878.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L3_068_000M1_scaffold_979_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1308..2291
DNA (984bp) protein (328aa)
Site-specific recombinase, phage integrase family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6H9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDR46740.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_068_000M1_scaffold_979_4
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2490..5468
DNA (2979bp) protein (993aa)
DNA/RNA helicase DEAD/DEAH box family n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VTG5_9FIRM
DNA/RNA helicase DEAD/DEAH box family {ECO:0000313|EMBL:CCZ93805.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
DNA or RNA helicases of superfamily II
L3_068_000M1_scaffold_979_5
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5481..5882
DNA (402bp) protein (134aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WDD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ93806.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L3_068_000M1_scaffold_979_6
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5970..9458
DNA (3489bp) protein (1163aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WMS7_9FIRM
Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:CCZ93807.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Topoisomerase DNA binding C4 zinc finger.
L3_068_000M1_scaffold_979_7
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9532..10299
DNA (768bp) protein (256aa)
Predicted transcriptional regulators n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHY7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK82392.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_979_8
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10363..12039
DNA (1677bp) protein (559aa)
YgiT-type zinc finger domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L5F4_9FIRM
YgiT-type zinc finger domain protein {ECO:0000313|EMBL:CDB80955.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_979_9
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12032..12814
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LFP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB80956.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_068_000M1_scaffold_979_10
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13032..13661
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB80957.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
RNA polymerase sigma factor, sigma-70 family
L3_068_000M1_scaffold_979_11
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13823..14848
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VTH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ93810.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_068_000M1_scaffold_979_12
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14845..15141
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LBQ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB80959.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_13
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15234..17252
DNA (2019bp) protein (673aa)
Signal transduction histidine kinase n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHY4_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK82389.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
Signal transduction histidine kinase
L3_068_000M1_scaffold_979_14
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17381..18754)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LFQ0_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
neurotransmitter:Na+ symporter, NSS family
L3_068_000M1_scaffold_979_15
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18943..19455
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB80962.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
DNA glycosylase
L3_068_000M1_scaffold_979_16
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19613..20449
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Undecaprenyl-diphosphatase n=2 Tax=Coprococcus RepID=D5HHY2_9FIRM
L3_068_000M1_scaffold_979_17
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20492..21715
DNA (1224bp) protein (408aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Coprococcus RepID=D5HHY1_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK82386.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_979_18
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21726..22706
DNA (981bp) protein (327aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Coprococcus RepID=D5HHY0_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDB80965.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_19
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22769..23623)
DNA (855bp) protein (285aa)
fructokinase (EC:2.7.1.4)
Fructokinase n=2 Tax=Coprococcus RepID=D5HHX9_9FIRM
Fructokinase {ECO:0000313|EMBL:CDB80966.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_20
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23851..23955
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6M4D0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82383.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_979_21
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24116..25495
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L0C3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB80968.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
MatE efflux family protein
L3_068_000M1_scaffold_979_22
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25662..26780
DNA (1119bp) protein (373aa)
Transcriptional regulator LuxR family n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBS3_9FIRM
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDB80969.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_068_000M1_scaffold_979_23
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26784..27152
DNA (369bp) protein (123aa)
Transcriptional regulator LuxR family n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBS3_9FIRM
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDB80969.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_068_000M1_scaffold_979_24
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27372..29279
DNA (1908bp) protein (636aa)
Fibronectin type III domain protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L5H4_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDB80970.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
IgA Peptidase M64./Fibronectin type III domain.
L3_068_000M1_scaffold_979_25
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29458..30792
DNA (1335bp) protein (445aa)
garK; glycerate kinase GarK (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LFR4_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDB80971.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_26
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30910..31455
DNA (546bp) protein (182aa)
Uncharacterized domain HDIG n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4D6_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDB80972.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
uncharacterized domain HDIG
L3_068_000M1_scaffold_979_27
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31452..32591
DNA (1140bp) protein (380aa)
Transporter, YbiR family n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHX6_9FIRM
transporter, YbiR family
Transporter, YbiR family {ECO:0000313|EMBL:CBK82381.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_068_000M1_scaffold_979_28
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32670..32909
DNA (240bp) protein (80aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=3 Tax=Coprococcus RepID=D5HHX5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family {ECO:0000313|EMBL:CDB80974.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_29
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32913..33224
DNA (312bp) protein (104aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=3 Tax=Coprococcus RepID=D5HHX5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family {ECO:0000313|EMBL:CDB80974.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_068_000M1_scaffold_979_30
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33410..34435
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EDP25357.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EDP25357.1};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Branched-chain amino acid aminotransferase, group II n=3 Tax=Coprococcus RepID=D5HHX4_9FIRM
Displaying items 1-30 of 31 in total

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