ggKbase home page

L3_068_000M1_scaffold_5171

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_5171_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..1338)
DNA (1338bp) protein (446aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZG13_9ACTN
L3_068_000M1_scaffold_5171_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1338..2852)
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M4_9ACTN
L3_068_000M1_scaffold_5171_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2852..3163)
DNA (312bp) protein (104aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75572.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_068_000M1_scaffold_5171_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3468..4406)
DNA (939bp) protein (313aa)
Sortase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4X6_9ACTN
Sortase family protein {ECO:0000313|EMBL:CDA36182.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
srtE; fimbrial associated sortase-like protein
L3_068_000M1_scaffold_5171_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4518..5246)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40243.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_068_000M1_scaffold_5171_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5273..6235)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40244.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_068_000M1_scaffold_5171_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6754..7518)
DNA (765bp) protein (255aa)
Cna protein B-type domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHY3_9ACTN
Cna protein B-type domain protein {ECO:0000313|EMBL:CDA36184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000M1_scaffold_5171_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7515..8450)
DNA (936bp) protein (312aa)
Cna protein B-type domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHY3_9ACTN
Cna protein B-type domain protein {ECO:0000313|EMBL:CDA36184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_068_000M1_scaffold_5171_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8526..10214)
DNA (1689bp) protein (563aa)
Cna protein B-type domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N2_9ACTN
Cna protein B-type domain protein {ECO:0000313|EMBL:EBA40248.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_068_000M1_scaffold_5171_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10186..10878)
DNA (693bp) protein (231aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75567.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying 10 items

View Taxonomy