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L3_068_000M1_scaffold_10502

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_10502_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..895)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74945.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_068_000M1_scaffold_10502_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1057..1881)
DNA (825bp) protein (275aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
tRNA pseudouridine synthase A n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF92_9ACTN
tRNA pseudouridine synthase A
L3_068_000M1_scaffold_10502_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1974..2441)
DNA (468bp) protein (156aa)
50S ribosomal protein L17 n=2 Tax=Collinsella RepID=A4EA87_9ACTN
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L17P
L3_068_000M1_scaffold_10502_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2472..3413)
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Collinsella RepID=A4EA86_9ACTN
L3_068_000M1_scaffold_10502_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3446..3760)
DNA (315bp) protein (105aa)
30S ribosomal protein S4 n=2 Tax=Collinsella RepID=A4EA85_9ACTN
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S4P
Displaying 5 items

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