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L3_068_000M1_scaffold_4457

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_4457_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCC1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07622.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_068_000M1_scaffold_4457_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

373..537
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCC0_CLOSV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM87625.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_068_000M1_scaffold_4457_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

632..1108
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0FRG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98124.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
L3_068_000M1_scaffold_4457_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1105..2703
DNA (1599bp) protein (533aa)
TraG/TraD family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH04_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEU98899.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Type IV secretory pathway, VirD4 components
L3_068_000M1_scaffold_4457_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2746..2958
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98900.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_000M1_scaffold_4457_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3167..3382
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C7GH06_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG94816.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_068_000M1_scaffold_4457_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3399..4268
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH07_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98902.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_000M1_scaffold_4457_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4289..4699
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0FRG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94814.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
conjugative transposon protein
L3_068_000M1_scaffold_4457_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4641..7076
DNA (2436bp) protein (812aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LS49_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23607.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_068_000M1_scaffold_4457_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7073..8023
DNA (951bp) protein (317aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
DNA modification methylase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B257_9FIRM
L3_068_000M1_scaffold_4457_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8020..10107
DNA (2088bp) protein (696aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0FRF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94811.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_068_000M1_scaffold_4457_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10141..10407
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7H722_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26623.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_068_000M1_scaffold_4457_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10397..11098
DNA (702bp) protein (234aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG94809.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_068_000M1_scaffold_4457_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11095..13194
DNA (2100bp) protein (700aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=3 Tax=Clostridiales RepID=D4LS45_9FIRM
L3_068_000M1_scaffold_4457_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13326..16850
DNA (3525bp) protein (1175aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9I3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08776.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L3_068_000M1_scaffold_4457_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16854..17798
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23601.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_068_000M1_scaffold_4457_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17801..18007
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG94805.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_068_000M1_scaffold_4457_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18454..18822)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG94803.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_068_000M1_scaffold_4457_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18827..19057)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FRE9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23598.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_068_000M1_scaffold_4457_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19150..20490)
DNA (1341bp) protein (447aa)
Relaxase/Mobilisation nuclease domain n=3 Tax=Clostridiales RepID=D4LS39_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL23597.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_068_000M1_scaffold_4457_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20451..20780)
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=4 Tax=Clostridiales RepID=D4LS38_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EDM87621.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_068_000M1_scaffold_4457_22
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21025..21390)
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ25266.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_068_000M1_scaffold_4457_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21545..21727
DNA (183bp) protein (61aa)
DNA binding domain, excisionase family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS22_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDM87619.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_068_000M1_scaffold_4457_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21720..22418
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS21_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM87618.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA-binding response regulator
L3_068_000M1_scaffold_4457_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22405..23463
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS20_9FIRM
two-component sensor histidine kinase
L3_068_000M1_scaffold_4457_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23616..24446
DNA (831bp) protein (277aa)
Conserved domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS19_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDM87616.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_068_000M1_scaffold_4457_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24448..25161
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS18_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM87615.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_068_000M1_scaffold_4457_28
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25142..26338
DNA (1197bp) protein (399aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NSY8_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ05264.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_068_000M1_scaffold_4457_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26365..26850
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87613.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_068_000M1_scaffold_4457_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26905..27861
DNA (957bp) protein (319aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS15_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDM87612.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
serine-type D-Ala-D-Ala carboxypeptidase
Displaying items 1-30 of 37 in total

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