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L3_068_000M1_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_163_1
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..536
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71773.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_2
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

557..1405
DNA (849bp) protein (283aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9Q6_9FIRM
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDE71772.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_3
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1656..2009
DNA (354bp) protein (118aa)
Thioredoxin n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7F2_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
trxA; Thioredoxin TrxA
L3_068_000M1_scaffold_163_4
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2086..2937
DNA (852bp) protein (284aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Thioredoxin reductase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K671_9FIRM
hypothetical protein
L3_068_000M1_scaffold_163_5
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3036..3686)
DNA (651bp) protein (217aa)
TrkA N-terminal domain protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K692_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDE71769.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
TrkA-N
L3_068_000M1_scaffold_163_6
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3698..5047)
DNA (1350bp) protein (450aa)
Potassium uptake protein TrkH family n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7Q9_9FIRM
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDE71768.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
TrkH family potassium uptake protein
L3_068_000M1_scaffold_163_7
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5203..5499)
DNA (297bp) protein (99aa)
Uncharacterized conserved protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9Q2_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDE71767.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_068_000M1_scaffold_163_8
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5643..7763)
DNA (2121bp) protein (707aa)
L-glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7Q5_9FIRM
Uncharacterized protein related to glutamine synthetase {ECO:0000313|EMBL:CDE71763.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_9
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7957..8763
DNA (807bp) protein (269aa)
Transketolase beta subunit n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9P9_9FIRM
Transketolase beta subunit {ECO:0000313|EMBL:CDE71762.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
transketolase, beta subunit
L3_068_000M1_scaffold_163_10
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8767..9687
DNA (921bp) protein (307aa)
Transketolase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7E8_9FIRM
Transketolase {ECO:0000313|EMBL:CDE71761.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
transketolase, alpha subunit
L3_068_000M1_scaffold_163_11
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9707..10381
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Uracil-DNA glycosylase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K663_9FIRM
uracil-DNA glycosylase
L3_068_000M1_scaffold_163_12
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10465..11346
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K683_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71759.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_13
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11383..11721
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71758.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_14
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11714..12013
DNA (300bp) protein (100aa)
Stress responsive A/B barrel domain protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9P5_9FIRM
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:CDE71757.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
stress responsive alpha-beta barrel domain-containing protein
L3_068_000M1_scaffold_163_15
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12176..14494
DNA (2319bp) protein (773aa)
Stage II sporulation protein E protein serine/threonine phosphatase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7E5_9FIRM
Stage II sporulation protein E protein serine/threonine phosphatase {ECO:0000313|EMBL:CDE71756.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
stage II sporulation protein E
L3_068_000M1_scaffold_163_16
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14585..15520)
DNA (936bp) protein (312aa)
Transcriptional regulator n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K659_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDE71755.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
transcriptional regulator
L3_068_000M1_scaffold_163_17
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15655..16410)
DNA (756bp) protein (252aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K680_9FIRM
L3_068_000M1_scaffold_163_18
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16545..17642
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7P6_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
GTP-binding protein YchF
L3_068_000M1_scaffold_163_19
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17655..19223
DNA (1569bp) protein (523aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9P0_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDE71752.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
sugar (glycoside-Pentoside-hexuronide) transporter
L3_068_000M1_scaffold_163_20
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19278..20033
DNA (756bp) protein (252aa)
Beta-lactamase domain protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7E1_9FIRM
Beta-lactamase domain protein {ECO:0000313|EMBL:CDE71751.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
putative metal dependent hydrolase
L3_068_000M1_scaffold_163_21
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20026..20922
DNA (897bp) protein (299aa)
CAAX protease self-immunity n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K655_9FIRM
CAAX protease self-immunity {ECO:0000313|EMBL:CDE71750.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
CAAX amino terminal protease
L3_068_000M1_scaffold_163_22
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20919..21386
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K674_9FIRM
orfX; rRNA large subunit methyltransferase
L3_068_000M1_scaffold_163_23
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21474..22397
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71748.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
carboxypeptidase
L3_068_000M1_scaffold_163_24
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22429..22914
DNA (486bp) protein (162aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Cytidine/deoxycytidylate deaminase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9N6_9FIRM
CMP/dCMP deaminase zinc-binding protein
L3_068_000M1_scaffold_163_25
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22938..23384)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71746.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_26
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23529..25178
DNA (1650bp) protein (550aa)
Zn-dependent protease with chaperone function-like protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K652_9FIRM
Zn-dependent protease with chaperone function-like protein {ECO:0000313|EMBL:CDE71745.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_27
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25132..25587
DNA (456bp) protein (152aa)
Zn-dependent protease with chaperone function-like protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K652_9FIRM
Zn-dependent protease with chaperone function-like protein {ECO:0000313|EMBL:CDE71745.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_068_000M1_scaffold_163_28
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25787..27358
DNA (1572bp) protein (524aa)
Internalin n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K670_9FIRM
Internalin {ECO:0000313|EMBL:CDE71744.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
internalin-like protein
L3_068_000M1_scaffold_163_29
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27433..27948)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71743.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein)
L3_068_000M1_scaffold_163_30
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28067..28819)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71742.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
methyltransferase
Displaying items 1-30 of 154 in total

View Taxonomy