ggKbase home page

L3_068_000M1_scaffold_2221

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2221_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

231..974
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25247.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_2221_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

979..2058
DNA (1080bp) protein (360aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBP9_9FIRM
L3_068_000M1_scaffold_2221_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2062..2685
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GU33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25239.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2747..2977)
DNA (231bp) protein (77aa)
UPF0109 protein BN557_01467 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GIF0_9FIRM
UPF0109 protein BN557_01467 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2990..3229)
DNA (240bp) protein (80aa)
30S ribosomal protein S16 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGV7_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpsP; 30S ribosomal protein S16
L3_068_000M1_scaffold_2221_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3285..4676)
DNA (1392bp) protein (464aa)
Signal recognition particle protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVC3_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ffh; signal recognition particle protein
L3_068_000M1_scaffold_2221_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4682..5047)
DNA (366bp) protein (122aa)
UPF0122 protein OBV_28090 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLB2_9FIRM
UPF0122 protein BN557_01464 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5206..5418
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GU28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25234.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5572..6396
DNA (825bp) protein (275aa)
Stage 0 sporulation protein A n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGV1_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
spo0A; stage 0 sporulation protein A
L3_068_000M1_scaffold_2221_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6463..6720
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27504.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6717..7301
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27503.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_2221_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7595..9319)
DNA (1725bp) protein (575aa)
Carbon starvation-induced protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWR4_9FIRM
Carbon starvation-induced protein {ECO:0000313|EMBL:CDB26139.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
cstA1; carbon starvation protein CstA1
L3_068_000M1_scaffold_2221_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9316..9855)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26141.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10184..11164)
DNA (981bp) protein (327aa)
signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJF4_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDB26142.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_2221_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11170..11856)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKZ6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB26143.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ompR; winged helix family two component transcriptional regulator
L3_068_000M1_scaffold_2221_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11957..12658)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27399.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12670..14244)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27400.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_18
unknown

Not on your lists

14800..14940
DNA (141bp) protein (47aa)

This feature has no annotations

L3_068_000M1_scaffold_2221_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14961..15857
DNA (897bp) protein (299aa)
D-methionine ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNB8_9FIRM
D-methionine ABC superfamily ATP binding cassette transporter binding protein {ECO:0000313|EMBL:CDB27402.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_068_000M1_scaffold_2221_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15892..16899
DNA (1008bp) protein (336aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPP3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB27403.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type metal ion transport system, ATPase component
L3_068_000M1_scaffold_2221_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16889..17593
DNA (705bp) protein (235aa)
D-methionine ABC superfamily ATP binding cassette transporter membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0B7_9FIRM
D-methionine ABC superfamily ATP binding cassette transporter membrane protein {ECO:0000313|EMBL:CDB27404.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type metal ion transport system, permease component
L3_068_000M1_scaffold_2221_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17659..18582)
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNE8_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
tsf; elongation factor Ts
L3_068_000M1_scaffold_2221_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18678..19406)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXH5_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpsB; 30S ribosomal protein S2
L3_068_000M1_scaffold_2221_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19594..20247)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25942.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20567..21106
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25943.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_2221_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21103..21306
DNA (204bp) protein (68aa)
DNA-binding helix-turn-helix protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW61_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB25944.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Cro/CI family transcriptional regulator
L3_068_000M1_scaffold_2221_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21303..22271
DNA (969bp) protein (323aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNF4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB25945.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter
L3_068_000M1_scaffold_2221_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22264..23493
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25946.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Na+ efflux ABC transporter permease
L3_068_000M1_scaffold_2221_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23490..24542
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25947.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Na+ efflux pump permease-like protein
L3_068_000M1_scaffold_2221_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24609..24905
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27442.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
Displaying items 1-30 of 43 in total

View Taxonomy