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L3_068_000M1_scaffold_1836

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1836_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..133
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HLL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26857.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_1836_2
unknown

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554..913
DNA (360bp) protein (120aa)

This feature has no annotations

L3_068_000M1_scaffold_1836_3
unknown

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1036..1497
DNA (462bp) protein (154aa)
peptidase C14, caspase catalytic subunit p20 n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D551
L3_068_000M1_scaffold_1836_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1698..2021)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HB02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20995.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_068_000M1_scaffold_1836_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(2018..2917)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72634.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_068_000M1_scaffold_1836_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(2950..3648)
DNA (699bp) protein (233aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4E4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative RNA polymerase sigma factor
L3_068_000M1_scaffold_1836_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3763..4596)
DNA (834bp) protein (278aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDA8_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCX73881.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
MerR family transcriptional regulator
L3_068_000M1_scaffold_1836_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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4760..6121
DNA (1362bp) protein (454aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAN2_9FIRM
5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) {ECO:0000313|EMBL:CCX73882.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative amidohydrolase
L3_068_000M1_scaffold_1836_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6197..7963
DNA (1767bp) protein (589aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ade1; adenine deaminase Ade1 (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D126_9FIRM
L3_068_000M1_scaffold_1836_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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8014..9345
DNA (1332bp) protein (444aa)
Xanthine/uracil permease family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D513_9FIRM
Xanthine/uracil permease family protein {ECO:0000313|EMBL:CCX73884.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
permease
L3_068_000M1_scaffold_1836_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9457..9930)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27599.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1836_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9942..11090)
DNA (1149bp) protein (383aa)
Putative cell division protein FtsW n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQA9_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:CDB27598.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative cell division protein FtsW
L3_068_000M1_scaffold_1836_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11238..11666
DNA (429bp) protein (143aa)
Putative hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZA7_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDB26536.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative hydrolase
L3_068_000M1_scaffold_1836_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11663..12376
DNA (714bp) protein (238aa)
Universal bacterial protein YeaZ n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HKT9_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CDB26537.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
peptidase M22 family protein
L3_068_000M1_scaffold_1836_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12404..13039
DNA (636bp) protein (212aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM72_9FIRM
L3_068_000M1_scaffold_1836_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13262..14404
DNA (1143bp) protein (381aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1V4_9FIRM
L3_068_000M1_scaffold_1836_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14394..15248
DNA (855bp) protein (285aa)
Spermidine/putrescine ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNG4_9FIRM
Spermidine/putrescine ABC transporter permease protein {ECO:0000313|EMBL:CDB27437.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
potB; spermidine/putrescine ABC transporter permease protein
L3_068_000M1_scaffold_1836_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15245..17242
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27438.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Spermidine/putrescine-binding periplasmic protein
L3_068_000M1_scaffold_1836_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17256..17657
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27439.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1836_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17832..19571
DNA (1740bp) protein (580aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSQ7_9FIRM
L3_068_000M1_scaffold_1836_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19677..20183
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27446.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_1836_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20194..20718
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27447.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Displaying 22 items

View Taxonomy