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L3_068_000M1_scaffold_1955

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1955_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
ATPases involved in chromosome partitioning n=14 Tax=Firmicutes RepID=D4K2I5_9FIRM
ATPases involved in chromosome partitioning
Uncharacterized protein {ECO:0000313|EMBL:EDP15322.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_068_000M1_scaffold_1955_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(904..1233)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39523.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_068_000M1_scaffold_1955_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1247..2413)
DNA (1167bp) protein (389aa)
Putative cation efflux protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H140_9FIRM
Putative cation efflux protein {ECO:0000313|EMBL:CDB27201.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative cation efflux protein
L3_068_000M1_scaffold_1955_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2418..3077)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27200.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3176..3682)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27743.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3817..4824)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H198_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27744.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_1955_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4826..5863)
DNA (1038bp) protein (346aa)
Putative stage V sporulation protein K n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTI7_9FIRM
Putative stage V sporulation protein K {ECO:0000313|EMBL:CDB27745.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
spoVK; putative stage V sporulation protein K
L3_068_000M1_scaffold_1955_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5884..6390)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27746.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(6401..6805)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72502.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_068_000M1_scaffold_1955_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6780..7790)
DNA (1011bp) protein (337aa)
Thiamine biosynthesis lipoprotein ApbE n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQQ4_9FIRM
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CDB27748.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
apbE; thiamine biosynthesis lipoprotein ApbE precursor
L3_068_000M1_scaffold_1955_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7787..8386)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1A2_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
recR; recombination protein RecR
L3_068_000M1_scaffold_1955_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8420..9064)
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTJ3_9FIRM
L3_068_000M1_scaffold_1955_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9454..9867
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27751.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9931..10935)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27431.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_1955_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10892..11914)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42509.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_068_000M1_scaffold_1955_16
unknown

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comp(12029..12664)
DNA (636bp) protein (212aa)

This feature has no annotations

L3_068_000M1_scaffold_1955_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12671..13642)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG28692.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_068_000M1_scaffold_1955_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13923..15089)
DNA (1167bp) protein (389aa)
SH3 domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP54_9FIRM
SH3 domain protein {ECO:0000313|EMBL:CDB26200.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15125..15421)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26199.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_1955_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(15545..16186)
DNA (642bp) protein (214aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MKU4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB86462.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Transcriptional regulator
L3_068_000M1_scaffold_1955_21
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(16263..17864)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EGT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91613.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_068_000M1_scaffold_1955_22
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(17858..18571)
DNA (714bp) protein (238aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EG30_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX91615.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ABC-type multidrug transport system, ATPase component
L3_068_000M1_scaffold_1955_23
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18558..19010)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AS78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42001.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L3_068_000M1_scaffold_1955_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19034..19543)
DNA (510bp) protein (170aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BDD8_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERI69853.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_068_000M1_scaffold_1955_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(20031..20762)
DNA (732bp) protein (244aa)
KDP operon transcriptional regulatory protein KdpE n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H1E2_9FIRM
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:CCY21894.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000M1_scaffold_1955_26
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(20752..21813)
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWY6_9FIRM
L3_068_000M1_scaffold_1955_27
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22125..23375
DNA (1251bp) protein (417aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Coprococcus catus GD/7 RepID=D4J4F1_9FIRM
Hemolysins and related proteins containing CBS domains
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CBK79222.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_068_000M1_scaffold_1955_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23408..24748
DNA (1341bp) protein (447aa)
Trk-type K+ transport systems membrane components n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWA6_9FIRM
Trk-type K+ transport systems membrane components {ECO:0000313|EMBL:CDB25541.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Trk-type K+ transport systems, membrane components
L3_068_000M1_scaffold_1955_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24768..25415
DNA (648bp) protein (216aa)
K+ transport systems NAD-binding component n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV26_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CDB25544.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
K+ transport systems, NAD-binding component
L3_068_000M1_scaffold_1955_30
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

25450..26634
DNA (1185bp) protein (395aa)
Predicted permease n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEB7_9FIRM
Predicted permease {ECO:0000313|EMBL:CCY23217.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted permease
Displaying items 1-30 of 33 in total

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