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L3_068_000M1_scaffold_295

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_295_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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512..2695
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26480.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2704..3534
DNA (831bp) protein (277aa)
Putative membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXN3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB26479.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3568..4386
DNA (819bp) protein (273aa)
Nucleotide-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM06_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDB26478.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative Mrp family protein
L3_068_000M1_scaffold_295_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4566..4751)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GYD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26261.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4768..5331)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26260.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5459..5683
DNA (225bp) protein (75aa)
Transcriptional regulator, XRE family n=2 Tax=Faecalibacterium prausnitzii RepID=D4K5V3_9FIRM
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CBL02962.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_068_000M1_scaffold_295_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5908..6627
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HKJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26477.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6913..8181)
DNA (1269bp) protein (423aa)
Putative transporter n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW42_9FIRM
Putative transporter {ECO:0000313|EMBL:CDB25491.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Hemolysins and related proteins containing CBS domains
L3_068_000M1_scaffold_295_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8406..9956)
DNA (1551bp) protein (517aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHM6_9FIRM
L3_068_000M1_scaffold_295_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10135..10878)
DNA (744bp) protein (248aa)
Putative peptidoglycan hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJ48_9FIRM
Putative peptidoglycan hydrolase {ECO:0000313|EMBL:CDB25493.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative peptidoglycan hydrolase
L3_068_000M1_scaffold_295_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10990..12213
DNA (1224bp) protein (408aa)
putative RNA methyltransferase (EC:2.1.1.-)
Putative RNA methyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUV7_9FIRM
Putative RNA methyltransferase {ECO:0000313|EMBL:CDB25494.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12238..13014
DNA (777bp) protein (259aa)
Phosphoesterase family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM43_9FIRM
Phosphoesterase family protein {ECO:0000313|EMBL:CDB25495.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13036..13527
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25496.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13520..14608
DNA (1089bp) protein (363aa)
Putative hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHP2_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDB25497.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative hydrolase
L3_068_000M1_scaffold_295_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14622..15617
DNA (996bp) protein (332aa)
putative L-asparaginase (EC:3.5.1.1)
Putative L-asparaginase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJ77_9FIRM
Putative L-asparaginase {ECO:0000313|EMBL:CDB25498.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15635..16471
DNA (837bp) protein (279aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM66_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16524..16832)
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHP5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thioredoxin
L3_068_000M1_scaffold_295_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16933..17415)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25504.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17467..18003)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25506.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18009..18626)
DNA (618bp) protein (206aa)
Peptidase M50 family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJ90_9FIRM
Peptidase M50 family protein {ECO:0000313|EMBL:CDB25508.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
peptidase M50 family protein
L3_068_000M1_scaffold_295_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18613..19506)
DNA (894bp) protein (298aa)
Putative metalloendopeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW86_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CDB25511.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative metalloendopeptidase
L3_068_000M1_scaffold_295_22
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19845..20366
DNA (522bp) protein (174aa)
Repeat protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHN8_9FIRM
Repeat protein {ECO:0000313|EMBL:EDR96377.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
cell wall/surface repeat protein
L3_068_000M1_scaffold_295_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20616..20978)
DNA (363bp) protein (121aa)
Nucleoid-associated protein BN557_01369 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKV2_9FIRM
Nucleoid-associated protein BN557_01369 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_295_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21020..22855)
DNA (1836bp) protein (612aa)
dnaX; DNA polymerase III gamma/tau subunit (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GI12_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDB25063.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_295_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23150..23926)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EBP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38234.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_068_000M1_scaffold_295_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

24254..26665
DNA (2412bp) protein (804aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
xfp; xylulose-5-phosphate phosphoketolase/fructose-6-phosphate phosphoketolase (EC:4.1.2.22 4.1.2.9)
Probable phosphoketolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0W3_9FIRM
L3_068_000M1_scaffold_295_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26727..28784)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26424.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter permease subunit
L3_068_000M1_scaffold_295_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28801..30900)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25225.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter permease subunit
L3_068_000M1_scaffold_295_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31059..31403)
DNA (345bp) protein (115aa)
50S ribosomal protein L17 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPU4_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplQ; 50S ribosomal protein L17
L3_068_000M1_scaffold_295_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31444..32397)
DNA (954bp) protein (318aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GYY3_9FIRM
Displaying items 1-30 of 150 in total

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