ggKbase home page

L3_068_000M1_scaffold_793

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_793_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146..949)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GU42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25249.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_793_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1059..1412
DNA (354bp) protein (118aa)
Putative ModE family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLC8_9FIRM
Putative ModE family transcriptional regulator {ECO:0000313|EMBL:CDB25250.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ModE family transcriptional regulator
L3_068_000M1_scaffold_793_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1714..2994)
DNA (1281bp) protein (427aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
M18 family aminopeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY98_9FIRM
Aspartyl aminopeptidase
L3_068_000M1_scaffold_793_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3083..3379)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26220.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_793_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3379..4398)
DNA (1020bp) protein (340aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWX0_9FIRM
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB26219.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
appF1; oligopeptide transport ATP-binding protein AppF
L3_068_000M1_scaffold_793_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4391..5548)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26218.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_068_000M1_scaffold_793_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5565..7289)
DNA (1725bp) protein (575aa)
Oligopeptide ABC transporter permease protein AppC n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJM6_9FIRM
Oligopeptide ABC transporter permease protein AppC {ECO:0000313|EMBL:CDB26217.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
appC1; oligopeptide transport system permease protein AppC
L3_068_000M1_scaffold_793_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7309..8295)
DNA (987bp) protein (329aa)
Oligopeptide ABC transporter permease protein AppB n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY92_9FIRM
Oligopeptide ABC transporter permease protein AppB {ECO:0000313|EMBL:CDB26216.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
appB1; oligopeptide transport system permease protein AppB
L3_068_000M1_scaffold_793_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8517..10790)
DNA (2274bp) protein (758aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP70_9FIRM
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDB26215.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
extracellular solute-binding protein
L3_068_000M1_scaffold_793_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10857..11429)
DNA (573bp) protein (191aa)
Putative transporter n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWW7_9FIRM
Putative transporter {ECO:0000313|EMBL:CDB26214.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_793_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11751..13577)
DNA (1827bp) protein (609aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL65_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDB26213.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type multidrug transport system, ATPase and permease components
L3_068_000M1_scaffold_793_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13564..15255)
DNA (1692bp) protein (564aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC superfamily ATP binding cassette transporter membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY88_9FIRM
ABC superfamily ATP binding cassette transporter membrane protein {ECO:0000313|EMBL:CDB26211.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_068_000M1_scaffold_793_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


comp(15562..15933)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP64_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rplL; 50S ribosomal protein L7/L12
L3_068_000M1_scaffold_793_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16009..16533)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWW2_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplJ; 50S ribosomal protein L10
L3_068_000M1_scaffold_793_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16753..17445)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJL5_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplA; 50S ribosomal protein L1
L3_068_000M1_scaffold_793_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17460..17885)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY84_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplK; 50S ribosomal protein L11
L3_068_000M1_scaffold_793_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18020..18544)
DNA (525bp) protein (175aa)
Transcription termination/antitermination protein NusG n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP59_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
nusG; transcription antitermination protein NusG
L3_068_000M1_scaffold_793_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18556..18771)
DNA (216bp) protein (72aa)
Putative preprotein translocase SecE subunit n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWV7_9FIRM
Putative preprotein translocase SecE subunit {ECO:0000313|EMBL:CDB26204.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
secE; putative preprotein translocase SecE subunit
L3_068_000M1_scaffold_793_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18790..18939)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL55_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpmG; 50S ribosomal protein L33
L3_068_000M1_scaffold_793_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19155..19712)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GHF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB24893.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
phosphoglycerate mutase family protein
L3_068_000M1_scaffold_793_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19709..20056)
DNA (348bp) protein (116aa)
Cobalamin biosynthesis protein CobU putative truncation n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKA1_9FIRM
Cobalamin biosynthesis protein CobU putative truncation {ECO:0000313|EMBL:CDB24895.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
cobalamin biosynthesis protein CobU
L3_068_000M1_scaffold_793_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(20061..20792)
DNA (732bp) protein (244aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
cobS; cobalamin synthase CobS (EC:2.-.-.-)
Cobalamin synthase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DC89_9FIRM
L3_068_000M1_scaffold_793_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20785..21324)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26264.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
cobalbumin biosynthesis protein
L3_068_000M1_scaffold_793_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21321..22424)
DNA (1104bp) protein (368aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
cobT; Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPB2_9FIRM
L3_068_000M1_scaffold_793_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22421..23191)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26267.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
xylose isomerase domain-containing protein TIM barrel
L3_068_000M1_scaffold_793_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23211..24431)
DNA (1221bp) protein (407aa)
Flavoprotein HI0933 family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLB4_9FIRM
Flavoprotein HI0933 family {ECO:0000313|EMBL:CDB26268.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_068_000M1_scaffold_793_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24428..24853)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Putative Holliday junction resolvase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSQ1_9FIRM
putative Holliday junction resolvase
L3_068_000M1_scaffold_793_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24994..26499)
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HG37_9FIRM
hypothetical protein
L3_068_000M1_scaffold_793_29
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26496..27185)
DNA (690bp) protein (230aa)
Response regulator n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMT5_CLOSH
two-component system signal transduction response regulator
Two-component system signal transduction response regulator {ECO:0000313|EMBL:AGC67969.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_068_000M1_scaffold_793_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(27233..28489)
DNA (1257bp) protein (419aa)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D788_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCX72722.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
family 2 glycosyl transferase
Displaying items 1-30 of 43 in total

View Taxonomy