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L3_068_000M1_scaffold_4064

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_4064_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..175)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33304.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_068_000M1_scaffold_4064_2
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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230..1099
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AMZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ25844.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_068_000M1_scaffold_4064_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1256..1651
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05885.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_068_000M1_scaffold_4064_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1614..4013
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ER74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60518.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_068_000M1_scaffold_4064_5
unknown

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4032..4178
DNA (147bp) protein (49aa)

This feature has no annotations

L3_068_000M1_scaffold_4064_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4178..5620
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036B6BE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00223.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_068_000M1_scaffold_4064_7
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6195..7985
DNA (1791bp) protein (597aa)
Group II intron-encoded protein LtrA n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UXJ8_9FIRM
Group II intron-encoded protein LtrA {ECO:0000313|EMBL:ERL22788.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
matR; maturase
L3_068_000M1_scaffold_4064_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8220..8924
DNA (705bp) protein (235aa)
NlpC/P60 family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTS6_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:EEG57571.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_068_000M1_scaffold_4064_9
unknown

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8917..9192
DNA (276bp) protein (92aa)

This feature has no annotations

L3_068_000M1_scaffold_4064_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9189..10523
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YPM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09697.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
bacteriocin
L3_068_000M1_scaffold_4064_11
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10535..12631
DNA (2097bp) protein (699aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ACU6_9FIRM
L3_068_000M1_scaffold_4064_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12648..13541
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46766.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_4064_13
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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13803..14111
DNA (309bp) protein (103aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YIU4_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDD31344.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Helix-turn-helix.
L3_068_000M1_scaffold_4064_14
unknown

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14111..14347
DNA (237bp) protein (79aa)

This feature has no annotations

L3_068_000M1_scaffold_4064_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14364..17657
DNA (3294bp) protein (1098aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F5AD6
Helicase {ECO:0000313|EMBL:KGJ52497.1}; Flags: Fragment;; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
putative helicase
Displaying 15 items

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