ggKbase home page

L3_068_000M1_scaffold_2570

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_2570_1
unknown

Not on your lists

105..539
DNA (435bp) protein (145aa)

This feature has no annotations

L3_068_000M1_scaffold_2570_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

524..2539
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X123_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93467.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_068_000M1_scaffold_2570_3
unknown

Not on your lists

2544..2795
DNA (252bp) protein (84aa)

This feature has no annotations

L3_068_000M1_scaffold_2570_4
unknown

Not on your lists

2825..3139
DNA (315bp) protein (105aa)

This feature has no annotations

L3_068_000M1_scaffold_2570_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3136..3558
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QX19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR08121.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_068_000M1_scaffold_2570_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3865..4686
DNA (822bp) protein (274aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJB4_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFB77274.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPases involved in chromosome partitioning
L3_068_000M1_scaffold_2570_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4643..5563
DNA (921bp) protein (307aa)
ParB-like protein n=5 Tax=Firmicutes RepID=B9Y985_9FIRM
ParB-like protein {ECO:0000313|EMBL:EEF67469.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ParB family protein
L3_068_000M1_scaffold_2570_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5570..6466
DNA (897bp) protein (299aa)
Putative sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR82_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:ERI97699.1}; Flags: Fragment;; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
sortase
L3_068_000M1_scaffold_2570_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6642..9266
DNA (2625bp) protein (875aa)
Putative Cell wall surface anchor family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EII1_9CLOT
Collagen adhesin,Predicted outer membrane protein,Cna protein B-type domain {ECO:0000313|EMBL:CEK36607.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative membrane protein
L3_068_000M1_scaffold_2570_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9281..11278
DNA (1998bp) protein (666aa)
Uncharacterized protein n=5 Tax=root RepID=N9WWS1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ07365.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_068_000M1_scaffold_2570_11
Listeria weihenstephanensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11300..12679
DNA (1380bp) protein (460aa)
Collagen binding protein n=1 Tax=Bacillus subtilis subsp. spizizenii (strain TU-B-10) RepID=G4P1N9_BACPT
Celll wall surface anchor family protein {ECO:0000313|EMBL:EUJ41110.1}; TaxID=1265845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria weihenstephanensis FSL R9-0317.;"
collagen binding protein
L3_068_000M1_scaffold_2570_12
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12771..13247
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSZ8_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00215.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_068_000M1_scaffold_2570_13
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13244..15124
DNA (1881bp) protein (627aa)
TRAG family protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA53_ETHHY
TRAG family protein
TRAG family protein {ECO:0000313|EMBL:ADU27414.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Displaying 13 items

View Taxonomy