ggKbase home page

L3_068_000M1_scaffold_1470

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_1470_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

142..1020
DNA (879bp) protein (293aa)
ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJK1_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE51785.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
oligopeptide ABC transporter permease
L3_068_000M1_scaffold_1470_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1038..1880
DNA (843bp) protein (281aa)
ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK16_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE51786.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_1470_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1964..2950
DNA (987bp) protein (329aa)
appD; oligopeptide ABC transporter (ATP-binding protein) (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IMF5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE51787.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_1470_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2947..3930
DNA (984bp) protein (328aa)
ABC transporter ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKG8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE51788.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
oligopeptide ABC transporter ATP-binding protein
L3_068_000M1_scaffold_1470_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4059..5138
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51789.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_1470_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5154..5939
DNA (786bp) protein (262aa)
Tetratricopeptide repeat protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJK6_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE51790.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
lipoprotein NlpI, contains TPR repeats
L3_068_000M1_scaffold_1470_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6015..6854
DNA (840bp) protein (280aa)
Tetratricopeptide repeat protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IMF9_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE51792.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
lipoprotein NlpI, contains TPR repeats
L3_068_000M1_scaffold_1470_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6872..7654
DNA (783bp) protein (261aa)
Tetratricopeptide repeat protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKH1_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE51793.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
lipoprotein NlpI, contains TPR repeats
L3_068_000M1_scaffold_1470_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7957..9912
DNA (1956bp) protein (652aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ63_9FIRM
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:CDE51794.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
peptidase S9 prolyl oligopeptidase
L3_068_000M1_scaffold_1470_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10096..11262
DNA (1167bp) protein (389aa)
Amidohydrolase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IH25_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDE51109.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
amidohydrolase
L3_068_000M1_scaffold_1470_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11504..12454
DNA (951bp) protein (317aa)
Glutathione ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIG5_9FIRM
Glutathione ABC transporter permease protein {ECO:0000313|EMBL:CDE51108.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
gsiC; glutathione ABC transporter permease
L3_068_000M1_scaffold_1470_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12472..13386
DNA (915bp) protein (305aa)
Glutathione transport system permease protein GsiD n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKF9_9FIRM
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:CDE51107.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
glutathione transport system permease GsiD
L3_068_000M1_scaffold_1470_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13400..14401
DNA (1002bp) protein (334aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II06_9FIRM
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CDE51106.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
oligopeptide transport ATP-binding protein OppD
L3_068_000M1_scaffold_1470_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14398..15375
DNA (978bp) protein (326aa)
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHJ5_9FIRM
Oligopeptide transport ATP-binding protein AppF {ECO:0000313|EMBL:CDE51105.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
oligopeptide transport ATP-binding protein AppF
L3_068_000M1_scaffold_1470_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15540..16049)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IH20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51104.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_1470_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16098..17519)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51103.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hemolysin
L3_068_000M1_scaffold_1470_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17724..18221)
DNA (498bp) protein (166aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II02_9FIRM
L3_068_000M1_scaffold_1470_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18291..18947)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IH16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51099.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_1470_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18969..19103)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51097.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_1470_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19187..23119)
DNA (3933bp) protein (1311aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHZ8_9FIRM
L3_068_000M1_scaffold_1470_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23222..27145)
DNA (3924bp) protein (1308aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHI5_9FIRM
L3_068_000M1_scaffold_1470_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27459..28373
DNA (915bp) protein (305aa)
Metallo-beta-lactamase family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IH11_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDE51094.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
metallo-beta-lactamase family protein
L3_068_000M1_scaffold_1470_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28821..29063
DNA (243bp) protein (81aa)
LSU ribosomal protein L7AE n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIF0_9FIRM
LSU ribosomal protein L7AE {ECO:0000313|EMBL:CDE51093.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ribosomal protein L7Ae-like
L3_068_000M1_scaffold_1470_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29139..29513
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKE4_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
30S ribosomal protein S12
L3_068_000M1_scaffold_1470_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29770..30240
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHZ4_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
30S ribosomal protein S7
L3_068_000M1_scaffold_1470_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30318..32426
DNA (2109bp) protein (703aa)
Elongation factor G n=2 Tax=root RepID=R7IHI0_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
translation elongation factor EF-G
L3_068_000M1_scaffold_1470_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32530..32709
DNA (180bp) protein (60aa)
Elongation factor Tu n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4R6_9FIRM
Elongation factor Tu {ECO:0000313|EMBL:CDE46635.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
translation elongation factor 1A (EF-1A/EF-Tu)
Displaying 27 items

View Taxonomy