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L3_068_000M1_scaffold_861

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000M1_scaffold_861_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(55..846)
DNA (792bp) protein (264aa)
DEAD-like helicase n=3 Tax=Clostridium clostridioforme RepID=N9XV70_9CLOT
DEAD-like helicase {ECO:0000313|EMBL:ENZ64258.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
DNA methylase
L3_068_000M1_scaffold_861_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1017..1370)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34313.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
group II intron reverse transcriptase maturase
L3_068_000M1_scaffold_861_3
unknown

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2171..2779
DNA (609bp) protein (203aa)

This feature has no annotations

L3_068_000M1_scaffold_861_4
unknown

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2800..3057
DNA (258bp) protein (86aa)

This feature has no annotations

L3_068_000M1_scaffold_861_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4117..4803)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48375.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4965..7376)
DNA (2412bp) protein (804aa)
glycosyl hydrolase family 2 (EC:3.2.1.31)
Putative glycosyl hydrolases family 2 sugar binding domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAR1_9FIRM
Putative glycosyl hydrolases family 2 sugar binding domain protein {ECO:0000313|EMBL:CDE48373.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7626..8021)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48372.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_8
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8018..11131)
DNA (3114bp) protein (1038aa)
Putative hydrolase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J0L1_AMPXN
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAM48410.1}; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG; 17667 / NBRC 15112 / Ep01).;"
L3_068_000M1_scaffold_861_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11502..12482
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48228.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12563..13189
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48226.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Region found in RelA / SpoT proteins.
L3_068_000M1_scaffold_861_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13158..13382
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48224.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13465..14025)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48223.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14022..15092)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48222.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15297..15734)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48221.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15928..16065
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48220.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_16
unknown

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16106..16585
DNA (480bp) protein (160aa)

This feature has no annotations

L3_068_000M1_scaffold_861_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16555..18582
DNA (2028bp) protein (676aa)
UvrABC system protein B n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8M0_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
excinuclease ABC subunit B
L3_068_000M1_scaffold_861_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18931..19062
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47159.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19062..19886
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47161.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19883..20617
DNA (735bp) protein (245aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9H0_9FIRM
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:CDE47162.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Predicted phosphohydrolases
L3_068_000M1_scaffold_861_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20722..22695
DNA (1974bp) protein (658aa)
Ig-like domain-containing surface protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7A7_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE47163.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_068_000M1_scaffold_861_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22720..23505
DNA (786bp) protein (262aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47164.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23538..24245
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I685_9FIRM
purine nucleoside phosphorylase
L3_068_000M1_scaffold_861_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24321..25661)
DNA (1341bp) protein (447aa)
gdhA; NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6Q9_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_068_000M1_scaffold_861_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25972..26754
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE47167.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Predicted divalent heavy-metal cations transporter
L3_068_000M1_scaffold_861_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26768..27385
DNA (618bp) protein (206aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7B0_9FIRM
L3_068_000M1_scaffold_861_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27898..29565)
DNA (1668bp) protein (556aa)
Sulphate transporter n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7B4_9FIRM
Sulphate transporter {ECO:0000313|EMBL:CDE47173.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sulfate transporter
L3_068_000M1_scaffold_861_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29991..30338)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5M8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rplT; 50S ribosomal protein L20
L3_068_000M1_scaffold_861_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30373..30573)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6S2_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
50S ribosomal protein L35
L3_068_000M1_scaffold_861_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30633..31364)
DNA (732bp) protein (244aa)
Translation initiation factor IF-3 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7B7_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
infC; translation initiation factor IF-3
Displaying items 1-30 of 52 in total

View Taxonomy